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MK797984.1__QCG76086.1__EST35_0205__00202
Bact-VirMK797984.1__QCG76086.1__EST35_0205__00202
Identity
- Accession:
- MK797984 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Arenbergviridae›
Wroclawvirus›
Pseudomonas_phage_vB_PaeM_PA5oct
TaxID: 2163605
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-113
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00231__D2-145
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.54 | 37.0 | 3.44e-01 | 71.3% | 85.4% |
| 1imvA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.52 | 37.0 | 2.94e-01 | 72.3% | 92.2% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.51 | 36.0 | 3.31e-01 | 73.3% | 77.2% |
| 5kf6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 44.0 | 3.36e-01 | 100.0% | 53.3% |
D2
medium
residues 137-286
Domain cluster:
rep: Salt_Pond_R2_C_D2_MG_scaffold_7_prodigal-single.1__X__X__00234__D180-301
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rsmA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 25.0 | 2.82e-01 | 76.0% | 50.4% |
| 1asuA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 34.0 | 3.37e-01 | 88.7% | 53.1% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 3.94e-01 | 73.3% | 100.0% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 27.0 | 3.10e-01 | 70.7% | 68.9% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 45.0 | 3.43e-01 | 99.3% | 57.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978331 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.63 | 27.0 | 3.85e-01 | 90.7% | 84.3% |
| 4028717 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.51 | 36.0 | 3.33e-01 | 72.0% | 99.0% |
| 3761115 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 45.0 | 3.30e-01 | 100.0% | 53.0% |
| 3400083 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.50 | 45.0 | 3.64e-01 | 100.0% | 70.3% |
D3
medium
residues 287-353