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MK799832.1__QCW22875.1__X__00051
Bact-VirMK799832.1__QCW22875.1__X__00051
Identity
- Accession:
- MK799832 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_S-B05
TaxID: 2484637
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-56
Domain cluster:
rep: MH920637.1__AYR01719.1__X__00016__D9-62
D2
high
residues 469-504
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.77 | 60.0 | 5.52e-01 | 100.0% | 70.9% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.75 | 62.0 | 5.69e-01 | 100.0% | 76.5% |
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.74 | 58.0 | 5.69e-01 | 100.0% | 90.7% |
| 2daqA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 3.14e-01 | 75.0% | 42.7% |
| 3mqgA02 | 2.20.70.110 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.57 | 44.0 | 4.38e-01 | 94.4% | 94.9% |
| 4g3wA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 42.0 | 2.96e-01 | 91.7% | 40.9% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 43.0 | 3.50e-01 | 94.4% | 61.5% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.54 | 40.0 | 2.33e-01 | 88.9% | 19.2% |
| 4mnkA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 40.0 | 3.44e-01 | 83.3% | 78.5% |
| 3oa5A01 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.53 | 41.0 | 3.00e-01 | 100.0% | 52.3% |
| 3opyI00 | 3.40.50.11920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 2.39e-01 | 88.9% | 44.6% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.53 | 39.0 | 3.48e-01 | 97.2% | 66.7% |
| 6lmjB00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.52 | 40.0 | 3.14e-01 | 97.2% | 61.2% |
| 4pt4B00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.52 | 38.0 | 3.05e-01 | 94.4% | 54.6% |
| 3alfA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 37.0 | 3.14e-01 | 83.3% | 80.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.89 | 79.0 | 4.36e-01 | 100.0% | 8.1% |
| 1107990 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.75 | 62.0 | 5.72e-01 | 100.0% | 78.0% |
| 3545467 | 391.1.2.10 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st | 0.69 | 51.0 | 5.04e-01 | 91.7% | 77.5% |
| 4989851 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.66 | 50.0 | 3.32e-01 | 97.2% | 24.1% |
| 3271846 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.65 | 49.0 | 4.39e-01 | 86.1% | 60.0% |
| 3923314 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.65 | 49.0 | 3.06e-01 | 88.9% | 34.3% |
| 4314405 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.58 | 41.0 | 2.57e-01 | 83.3% | 12.2% |
| 4303957 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.58 | 43.0 | 2.88e-01 | 83.3% | 20.6% |
| 391086 | 208.1.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Hexapep_2 | 0.56 | 41.0 | 2.78e-01 | 94.4% | 18.8% |
| 3589736 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 39.0 | 3.37e-01 | 80.6% | 62.9% |
| 3699229 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.55 | 47.0 | 2.64e-01 | 100.0% | 21.3% |
| 3988098 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.54 | 39.0 | 2.90e-01 | 83.3% | 66.7% |
| 5017559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 3.43e-01 | 86.1% | 70.8% |
| 3457887 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.56e-01 | 83.3% | 71.1% |
| 3420078 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.52 | 41.0 | 2.28e-01 | 100.0% | 9.7% |
| 4114361 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.51 | 37.0 | 3.61e-01 | 83.3% | 80.0% |
D3
medium
residues 109-180
Domain cluster:
rep: KJ528544.1__AHZ10892.1__WP2_20__00020__D418-502
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sucA02 | 2.160.10.20 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Insect antifreeze protein | 0.86 | 70.0 | 5.60e-01 | 100.0% | 47.0% |
| 2yo0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.74 | 68.0 | 5.15e-01 | 100.0% | 49.1% |
| 4e79A02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.72 | 63.0 | 4.56e-01 | 100.0% | 45.2% |
| 3f1xA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.72 | 64.0 | 5.86e-01 | 100.0% | 82.1% |
| 3mqgC01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.71 | 64.0 | 5.00e-01 | 100.0% | 58.8% |
| 1thjA00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.71 | 63.0 | 4.52e-01 | 100.0% | 44.6% |
| 3jqyC00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.70 | 61.0 | 4.41e-01 | 100.0% | 50.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4593120 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.89 | 70.0 | 5.09e-01 | 100.0% | 33.7% |
| 5083946 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.77 | 68.0 | 6.05e-01 | 100.0% | 70.0% |
| 3716111 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.75 | 68.0 | 5.20e-01 | 100.0% | 45.6% |
| None | — | 0.74 | 67.0 | 4.94e-01 | 100.0% | 38.9% | |
| 3212946 | 208.1.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B | 0.74 | 66.0 | 5.58e-01 | 100.0% | 59.7% |
| 3250015 | 208.1.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B | 0.73 | 66.0 | 5.93e-01 | 100.0% | 72.0% |
| 3595922 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.73 | 65.0 | 5.37e-01 | 100.0% | 56.6% |
| 4187119 | 208.1.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Hexapep_2 | 0.72 | 65.0 | 4.66e-01 | 100.0% | 40.5% |
| 5008903 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.72 | 65.0 | 5.15e-01 | 100.0% | 50.0% |
| 3339925 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 55.0 | 3.64e-01 | 100.0% | 27.4% |
D4
medium
residues 181-322
Domain cluster:
rep: IMGVR_UViG_2660238813_000001-2660238813-2663687523__D440-569
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wp8A02 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.86 | 74.0 | 7.23e-01 | 100.0% | 83.6% |
| 1p9hA00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.83 | 73.0 | 6.68e-01 | 100.0% | 72.6% |
| 3sucA02 | 2.160.10.20 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Insect antifreeze protein | 0.83 | 69.0 | 7.15e-01 | 97.2% | 92.5% |
| 3r0sA01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.82 | 77.0 | 6.90e-01 | 100.0% | 88.3% |
| 3d98A02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.81 | 71.0 | 6.95e-01 | 93.0% | 92.1% |
| 2iu8C02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.80 | 75.0 | 6.44e-01 | 100.0% | 81.5% |
| 3t57A01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.79 | 74.0 | 6.38e-01 | 100.0% | 81.2% |
| 1thjA00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.76 | 69.0 | 5.95e-01 | 96.5% | 85.9% |
| 2wlgB00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.75 | 69.0 | 6.06e-01 | 100.0% | 85.2% |
| 4n27A00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.75 | 66.0 | 6.13e-01 | 94.4% | 83.4% |
| 8gppA01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.73 | 64.0 | 5.80e-01 | 93.0% | 76.3% |
| 1fxjA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.69 | 45.0 | 5.43e-01 | 83.8% | 100.0% |
| 5afuV00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.66 | 60.0 | 5.73e-01 | 97.9% | 84.8% |
| 5l6vE02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.64 | 50.0 | 5.21e-01 | 90.1% | 87.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3984088 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.93 | 75.0 | 6.40e-01 | 100.0% | 56.2% |
| 4593120 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.93 | 75.0 | 6.88e-01 | 100.0% | 67.4% |
| 3965736 | 3512.1.1.0 ↗ | beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain | 0.92 | 75.0 | 6.49e-01 | 100.0% | 58.5% |
| 4394203 | 3512.1.1.0 ↗ | beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain | 0.88 | 75.0 | 5.43e-01 | 100.0% | 37.0% |
| 4066767 | 208.1.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Hexapep_2 | 0.82 | 77.0 | 6.22e-01 | 100.0% | 68.5% |
| 4570556 | 208.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep, GMPPB_C | 0.82 | 77.0 | 6.24e-01 | 100.0% | 69.2% |
| 4110478 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.82 | 77.0 | 6.63e-01 | 100.0% | 72.4% |
| 4142167 | 208.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep, Hexapep_2, GMPPB_C | 0.81 | 76.0 | 6.71e-01 | 100.0% | 75.0% |
| 4401275 | 208.1.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Hexapep_2 | 0.81 | 76.0 | 6.16e-01 | 100.0% | 69.6% |
| 4951849 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.80 | 75.0 | 7.17e-01 | 100.0% | 97.5% |
| 4162539 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.79 | 69.0 | 5.89e-01 | 93.0% | 80.5% |
| 5010157 | 208.1.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep_GlmU | 0.78 | 60.0 | 6.65e-01 | 79.6% | 99.1% |
| 3965420 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.77 | 65.0 | 6.93e-01 | 93.7% | 99.2% |
| 5081284 | 208.1.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B | 0.77 | 55.0 | 6.39e-01 | 83.1% | 100.0% |
| 4597979 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 65.0 | 5.83e-01 | 89.4% | 71.6% |
| 1503827 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.76 | 73.0 | 6.00e-01 | 100.0% | 60.8% |
| 3191264 | 208.1.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B | 0.76 | 59.0 | 6.05e-01 | 87.3% | 83.7% |
| 3962277 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 67.0 | 6.24e-01 | 93.7% | 82.8% |
| 2900924 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.76 | 67.0 | 6.25e-01 | 93.7% | 83.2% |
| 3943780 | 208.1.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Hexapep_2 | 0.72 | 65.0 | 6.38e-01 | 95.1% | 96.0% |
| 3182022 | 208.1.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Mac | 0.63 | 56.0 | 4.99e-01 | 97.9% | 77.3% |
| 3671246 | 208.1.1.29 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep_UGP3_C | 0.61 | 47.0 | 4.14e-01 | 80.3% | 87.0% |
| 4013675 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.60 | 50.0 | 4.59e-01 | 88.7% | 79.5% |
| 4673671 | 3512.1.1.0 ↗ | beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain | 0.55 | 43.0 | 4.56e-01 | 87.3% | 89.2% |
D5
medium
residues 323-413
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sucA02 | 2.160.10.20 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Insect antifreeze protein | 0.74 | 59.0 | 5.13e-01 | 100.0% | 57.5% |
| 2xqhA01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.68 | 61.0 | 5.28e-01 | 100.0% | 64.4% |
| 3s6lD00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.66 | 60.0 | 4.90e-01 | 100.0% | 55.7% |
| 2cu2A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 42.0 | 2.83e-01 | 89.0% | 18.8% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.52 | 40.0 | 2.60e-01 | 83.5% | 97.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4174964 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.70 | 47.0 | 3.70e-01 | 86.8% | 34.1% |
| 4101253 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.69 | 61.0 | 4.86e-01 | 100.0% | 49.7% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.62 | 34.0 | 2.46e-01 | 86.8% | 17.9% |
| 5074655 | 208.1.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep_2 | 0.61 | 53.0 | 4.89e-01 | 96.7% | 99.2% |
| 5074368 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.60 | 53.0 | 3.94e-01 | 98.9% | 49.8% |
| 4026099 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.60 | 51.0 | 4.43e-01 | 97.8% | 80.0% |
| 5075068 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.56 | 48.0 | 3.99e-01 | 100.0% | 68.4% |