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MK799832.1__QCW23073.1__X__00249

Bact-Vir

MK799832.1__QCW23073.1__X__00249

Identity

Accession:
MK799832 ↗
Kingdom:
phage

Quality

80.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 104-153
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pd0A05 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.68 50.0 3.57e-01 78.0% 85.8%
3efoB05 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.66 48.0 3.58e-01 78.0% 87.6%
1v7wA02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.66 47.0 3.97e-01 76.0% 97.6%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 47.0 3.90e-01 78.0% 68.5%
3m4pA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 46.0 3.57e-01 76.0% 67.9%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 3.75e-01 78.0% 68.8%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 45.0 3.76e-01 78.0% 66.3%
2xgtB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 45.0 3.64e-01 78.0% 68.3%
6kwzA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.62 45.0 3.62e-01 78.0% 84.7%
1d0nA02 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.62 45.0 3.47e-01 78.0% 70.0%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 43.0 3.45e-01 76.0% 65.7%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 3.63e-01 78.0% 67.0%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 3.26e-01 80.0% 85.0%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 43.0 3.23e-01 76.0% 58.6%
1d0nA06 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.61 44.0 3.26e-01 78.0% 65.4%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 43.0 3.40e-01 76.0% 67.0%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 42.0 3.43e-01 76.0% 52.5%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 43.0 3.43e-01 78.0% 71.2%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 42.0 3.13e-01 78.0% 49.6%
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 3.84e-01 74.0% 90.5%
3u50C01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 42.0 3.16e-01 76.0% 72.4%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.59 49.0 3.11e-01 100.0% 53.7%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 3.35e-01 76.0% 67.6%
1vybA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.59 45.0 2.94e-01 86.0% 47.0%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 43.0 3.08e-01 80.0% 85.8%
4ah6A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 41.0 3.20e-01 76.0% 64.0%
1wraA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.58 48.0 3.02e-01 96.0% 30.7%
1v1pB02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 3.60e-01 76.0% 82.4%
3c26A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 48.0 3.12e-01 100.0% 34.6%
1akoA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.57 48.0 3.00e-01 94.0% 50.4%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 44.0 3.02e-01 86.0% 39.9%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 2.99e-01 80.0% 78.9%
1boxA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.56 43.0 3.57e-01 86.0% 67.4%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 39.0 2.50e-01 74.0% 51.7%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.55 45.0 2.79e-01 100.0% 51.0%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 38.0 2.49e-01 74.0% 55.3%
2nttA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 39.0 3.54e-01 78.0% 82.9%
2fokA03 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.54 43.0 3.02e-01 92.0% 65.1%
1edzA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 38.0 2.79e-01 78.0% 49.4%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 39.0 3.13e-01 82.0% 53.2%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.53 42.0 2.69e-01 96.0% 75.0%
5wydA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 39.0 2.64e-01 82.0% 55.9%
1b5eA00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.52 43.0 2.81e-01 96.0% 43.6%
2f9iD00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.52 39.0 2.54e-01 84.0% 54.9%
6p1hB02 2.40.50.430 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 37.0 2.74e-01 76.0% 58.7%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.52 40.0 3.14e-01 90.0% 72.9%
1wi5A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.24e-01 76.0% 86.7%
4kmaA02 3.30.1360.230 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Sufu, C-terminal domain 0.51 42.0 3.23e-01 94.0% 64.7%
1q2yA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 41.0 3.14e-01 100.0% 77.9%
6tnyB02 2.40.50.430 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 35.0 2.79e-01 76.0% 56.2%
2k6pA00 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.50 40.0 3.42e-01 90.0% 98.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3398632 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.65 47.0 3.73e-01 78.0% 73.0%
138604 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 46.0 3.62e-01 76.0% 71.0%
3647740 2.1.1.69 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 0.64 46.0 3.28e-01 76.0% 42.7%
4943619 224.1.1.2 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.64 46.0 3.73e-01 78.0% 74.7%
3577464 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.64 49.0 3.03e-01 86.0% 29.7%
4422569 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 45.0 3.24e-01 78.0% 45.2%
4032678 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 45.0 3.59e-01 76.0% 66.0%
3600644 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 44.0 3.36e-01 76.0% 51.2%
5045187 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 44.0 3.43e-01 76.0% 60.0%
4465652 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 44.0 3.30e-01 76.0% 46.2%
3212469 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 3.35e-01 78.0% 47.7%
4936924 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 44.0 3.51e-01 76.0% 53.3%
4225239 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 44.0 3.44e-01 76.0% 65.5%
5025916 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 44.0 3.19e-01 76.0% 49.0%
5036639 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 44.0 3.53e-01 76.0% 69.0%
5027798 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 43.0 3.70e-01 76.0% 69.0%
4538497 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 43.0 3.46e-01 76.0% 65.7%
3397916 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.61 55.0 2.99e-01 100.0% 10.2%
5042273 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 43.0 3.39e-01 76.0% 54.5%
4250626 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 44.0 3.26e-01 78.0% 45.2%
3513264 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 43.0 3.12e-01 76.0% 50.0%
4458323 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 45.0 3.36e-01 82.0% 83.7%
4969369 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 43.0 3.24e-01 76.0% 53.6%
3770082 2.1.1.52 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.61 44.0 3.03e-01 78.0% 51.1%
3476052 2.1.1.142 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.60 43.0 3.07e-01 76.0% 42.7%
4668205 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 43.0 3.01e-01 78.0% 50.9%
300261 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 42.0 3.37e-01 76.0% 64.5%
5063149 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 43.0 3.37e-01 78.0% 48.7%
4985184 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.60 43.0 3.70e-01 78.0% 68.2%
1064207 2.1.1.22 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.60 43.0 3.64e-01 78.0% 68.5%
None 0.60 43.0 3.00e-01 78.0% 50.9%
4015838 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 42.0 3.05e-01 76.0% 49.7%
5056791 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 42.0 3.66e-01 76.0% 82.5%
3989338 2.1.1.279 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4131 0.59 42.0 3.02e-01 76.0% 54.2%
4960276 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 42.0 3.51e-01 76.0% 68.9%
3105016 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 42.0 2.95e-01 78.0% 50.3%
4932470 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 41.0 3.42e-01 76.0% 75.6%
4964990 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 40.0 3.42e-01 76.0% 68.9%
5017464 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 41.0 3.31e-01 76.0% 56.0%
5012547 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 41.0 3.42e-01 78.0% 67.8%
4012836 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 3.08e-01 84.0% 82.0%
5048444 5.1.4.143 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF6454 0.56 45.0 3.00e-01 98.0% 48.6%
4934826 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 44.0 2.87e-01 100.0% 36.9%
3969495 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 46.0 3.02e-01 100.0% 41.7%
3614693 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 42.0 3.13e-01 84.0% 86.7%
4992091 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.55 42.0 2.43e-01 84.0% 29.7%
3196597 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.55 45.0 3.13e-01 98.0% 86.1%
3990098 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 37.0 2.96e-01 72.0% 58.2%
4209798 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.54 43.0 3.63e-01 88.0% 78.8%
5031349 266.1.1.1 a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.54 45.0 3.06e-01 100.0% 54.9%
4982610 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.54 41.0 2.64e-01 84.0% 51.5%
4613401 5.1.4.51 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 0.54 43.0 2.58e-01 100.0% 41.0%
3585836 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.53 40.0 2.64e-01 90.0% 43.0%
3906634 5.1.4.382 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 0.53 44.0 2.69e-01 100.0% 73.8%
4943538 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 41.0 2.41e-01 84.0% 35.0%
4240410 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.53 43.0 3.15e-01 94.0% 61.3%
5017082 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.53 40.0 2.43e-01 84.0% 45.6%
3278671 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.53 45.0 2.76e-01 98.0% 48.1%
3485317 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 43.0 2.48e-01 100.0% 20.7%
3286971 2486.1.1.3 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.52 37.0 2.54e-01 82.0% 58.7%
3518437 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.52 36.0 3.28e-01 78.0% 81.3%
3517194 109.54.1.0 alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.52 41.0 2.45e-01 100.0% 30.2%