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MK800154.1__QDB70558.1__X__00073
Bact-VirMK800154.1__QDB70558.1__X__00073
Identity
- Accession:
- MK800154 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
TaxID: 2583507
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-69
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02075.24 best | RuvC | 30.3 | 4.90e-07 | 94.2% | 36.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ep4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.86 | 81.0 | 5.90e-01 | 100.0% | 42.8% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.84 | 79.0 | 5.84e-01 | 100.0% | 44.3% |
| 5y27A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.70 | 45.0 | 4.02e-01 | 84.1% | 46.9% |
| 2cqnA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.63 | 37.0 | 3.56e-01 | 76.8% | 51.9% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.61 | 37.0 | 3.50e-01 | 72.5% | 50.0% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.61 | 44.0 | 3.87e-01 | 76.8% | 95.1% |
| 7ys6A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 44.0 | 3.03e-01 | 95.7% | 92.5% |
| 2nwhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 45.0 | 2.99e-01 | 98.6% | 83.7% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.52 | 34.0 | 2.51e-01 | 73.9% | 25.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4610182 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.89 | 84.0 | 5.86e-01 | 100.0% | 37.4% |
| 4543638 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.89 | 83.0 | 6.09e-01 | 100.0% | 43.0% |
| 4106513 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 84.0 | 6.04e-01 | 100.0% | 41.2% |
| 3387304 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 83.0 | 6.13e-01 | 100.0% | 44.4% |
| 4292358 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 82.0 | 5.98e-01 | 98.6% | 42.4% |
| 4240117 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 83.0 | 5.95e-01 | 100.0% | 41.0% |
| 4252006 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 83.0 | 6.03e-01 | 100.0% | 42.4% |
| 4522962 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 83.0 | 5.95e-01 | 100.0% | 40.0% |
| 3966304 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.88 | 83.0 | 6.15e-01 | 100.0% | 45.2% |
| 4579381 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 82.0 | 6.06e-01 | 100.0% | 44.4% |
| 4373226 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 83.0 | 5.82e-01 | 100.0% | 37.8% |
| 4631411 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.88 | 82.0 | 6.07e-01 | 100.0% | 44.9% |
| 4275354 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.87 | 82.0 | 6.09e-01 | 100.0% | 45.8% |
| 4162427 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.87 | 82.0 | 6.04e-01 | 100.0% | 44.4% |
| 4202129 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.87 | 81.0 | 6.00e-01 | 100.0% | 45.6% |
| 4218879 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.87 | 82.0 | 6.06e-01 | 100.0% | 45.2% |
| 4162179 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.86 | 81.0 | 6.02e-01 | 100.0% | 45.8% |
| 4938348 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.86 | 80.0 | 5.88e-01 | 100.0% | 46.7% |
| 4123278 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.86 | 80.0 | 5.82e-01 | 100.0% | 41.8% |
| 4069907 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.86 | 79.0 | 5.78e-01 | 100.0% | 42.9% |
| 4571749 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.85 | 80.0 | 5.87e-01 | 100.0% | 42.4% |
| 4638438 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.85 | 79.0 | 5.85e-01 | 100.0% | 45.0% |
| 4296237 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.85 | 79.0 | 5.90e-01 | 100.0% | 45.8% |
| 4484979 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.84 | 79.0 | 5.73e-01 | 100.0% | 41.7% |
| 4414942 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.81 | 75.0 | 5.57e-01 | 100.0% | 43.8% |
| 5040920 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 73.0 | 5.26e-01 | 100.0% | 41.7% |
| 4430764 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 41.0 | 3.88e-01 | 79.7% | 52.9% |
| 4999336 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.62 | 37.0 | 3.47e-01 | 76.8% | 48.2% |
| 3260793 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.61 | 46.0 | 3.77e-01 | 82.6% | 94.1% |
| 3228112 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.61 | 53.0 | 4.43e-01 | 100.0% | 87.2% |
| 3628877 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 43.0 | 2.73e-01 | 78.3% | 25.1% |
| 3897399 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.52 | 37.0 | 3.60e-01 | 76.8% | 66.3% |
| 3939282 | 650.1.1.10 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › PF30912 | 0.51 | 37.0 | 3.63e-01 | 76.8% | 70.7% |