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MK805329.1__QGH74564.1__X__00001

Bact-Vir

MK805329.1__QGH74564.1__X__00001

Identity

Accession:
MK805329 ↗
Kingdom:
phage

Quality

81.4 mean pLDDT

Taxonomy

TaxID: 2664248

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-145
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11741.14 best AMIN 66.2 3.50e-18 96.3% 98.0%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4binA01 2.60.40.3500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.99 96.0 9.41e-01 100.0% 94.0%
4aqzA00 2.60.40.3470 Mainly Beta › Sandwich › Immunoglobulin-like › 0.80 70.0 6.47e-01 100.0% 73.9%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.75 52.0 5.63e-01 100.0% 84.8%
2o30A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 47.0 5.40e-01 100.0% 86.6%
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 51.0 5.56e-01 100.0% 84.8%
2cg9X01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 48.0 5.03e-01 100.0% 75.0%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 49.0 4.91e-01 100.0% 70.0%
6d6tA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.70 51.0 4.16e-01 77.1% 84.8%
2bjnB00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.66 48.0 4.38e-01 76.1% 96.6%
2w8eA00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.66 49.0 3.98e-01 78.0% 85.7%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.66 47.0 3.80e-01 74.3% 92.9%
6ruiK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.65 45.0 4.67e-01 78.9% 75.7%
3h7lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 39.0 4.25e-01 100.0% 74.2%
4feiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 48.0 4.96e-01 100.0% 86.3%
2lgnA00 2.60.40.2850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 32.0 3.97e-01 100.0% 80.3%
6ewnA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 50.0 5.25e-01 100.0% 93.9%
1ej6A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 4.80e-01 78.9% 100.0%
4lfhD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 4.70e-01 79.8% 94.1%
2kmwA01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 4.58e-01 78.9% 95.2%
1ry9A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 43.0 4.06e-01 76.1% 67.7%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 44.0 4.26e-01 78.9% 73.2%
1shsA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 47.0 4.65e-01 100.0% 81.7%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 41.0 4.02e-01 73.4% 72.7%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 48.0 4.52e-01 100.0% 73.8%
3en9A03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 36.0 4.32e-01 78.0% 100.0%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 43.0 4.57e-01 82.6% 97.9%
4xvoA01 2.60.40.3710 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 4.43e-01 83.5% 97.8%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.29e-01 81.7% 97.1%
4o1pD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 41.0 3.18e-01 80.7% 48.0%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 39.0 3.72e-01 76.1% 64.8%
1rjbA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 39.0 3.86e-01 79.8% 100.0%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.08e-01 78.9% 95.0%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 4.19e-01 77.1% 93.3%
3v6oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 4.15e-01 81.7% 97.0%
1t0pB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 4.10e-01 82.6% 96.5%
3mlpA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.74e-01 100.0% 67.9%
4djmA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 4.01e-01 97.2% 98.8%
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.51 37.0 3.07e-01 77.1% 87.4%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1307482 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.99 96.0 9.48e-01 100.0% 95.6%
1815427 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.93 84.0 8.44e-01 100.0% 93.5%
3968519 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.93 85.0 8.55e-01 100.0% 95.5%
3944288 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.87 78.0 7.66e-01 99.1% 88.7%
3981007 319.3.1.0 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ 0.87 78.0 7.94e-01 99.1% 97.1%
3387490 319.3.1.0 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ 0.87 74.0 7.77e-01 99.1% 98.0%
3970193 319.3.1.0 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ 0.86 71.0 7.62e-01 100.0% 98.9%
3286862 319.3.1.2 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN-like 0.83 77.0 7.14e-01 100.0% 97.0%
3303486 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.73 51.0 5.15e-01 100.0% 71.8%
3441068 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.72 53.0 5.56e-01 99.1% 83.7%
3696868 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.72 51.0 4.99e-01 100.0% 67.5%
5052421 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.71 48.0 5.08e-01 80.7% 78.9%
3700394 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.69 49.0 4.85e-01 99.1% 69.6%
3675847 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.67 35.0 2.50e-01 84.4% 17.2%
3500564 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 51.0 5.19e-01 100.0% 82.9%
3500665 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.65 50.0 5.31e-01 100.0% 91.6%
3288315 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.65 51.0 4.92e-01 100.0% 72.8%
5076855 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.64 52.0 5.25e-01 100.0% 87.0%
3256071 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.63 51.0 4.75e-01 100.0% 68.9%
5055486 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 45.0 5.04e-01 100.0% 96.5%
3462522 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 45.0 4.36e-01 75.2% 85.6%
154597 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 48.0 4.96e-01 100.0% 86.3%
3530658 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 47.0 4.64e-01 100.0% 74.8%
4931267 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 50.0 4.57e-01 100.0% 66.4%
3447632 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 58.0 4.90e-01 100.0% 80.0%
3309018 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.61 51.0 4.57e-01 100.0% 64.0%
3444611 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.61 47.0 3.68e-01 80.7% 63.8%
4953384 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.61 50.0 5.11e-01 100.0% 90.5%
5024351 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 47.0 4.18e-01 100.0% 58.1%
1954213 241.1.1.6 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN 0.60 43.0 3.95e-01 74.3% 69.0%
5028159 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 49.0 4.55e-01 100.0% 69.9%
5033186 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 49.0 4.42e-01 100.0% 65.0%
4927237 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 48.0 4.41e-01 100.0% 65.0%
3366280 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.60 42.0 4.35e-01 71.6% 92.0%
3959682 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 36.0 4.19e-01 100.0% 85.3%
3285929 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 42.0 4.57e-01 79.8% 88.9%
4451235 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.60 44.0 3.37e-01 78.9% 63.4%
3276159 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.60 46.0 3.32e-01 80.7% 40.3%
3364258 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.59 43.0 4.76e-01 76.1% 96.6%
4962569 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 47.0 4.32e-01 100.0% 64.1%
3253360 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 49.0 4.50e-01 100.0% 67.8%
4494422 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 43.0 3.87e-01 76.1% 60.7%
4549948 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 42.0 4.15e-01 75.2% 76.7%
3965787 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.59 43.0 3.91e-01 77.1% 61.3%
4236566 304.8.1.65 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT, PF27446 0.59 42.0 4.05e-01 76.1% 70.0%
3321864 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 43.0 4.29e-01 76.1% 81.8%
4114421 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.58 42.0 4.33e-01 76.1% 86.7%
4545902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 41.0 4.46e-01 78.0% 88.9%
3384789 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.58 42.0 4.27e-01 76.1% 80.9%
4936979 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 47.0 4.40e-01 100.0% 71.5%
4390550 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.58 43.0 4.40e-01 77.1% 91.4%
4292806 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 42.0 4.31e-01 75.2% 84.8%
4500983 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.58 42.0 3.75e-01 76.1% 56.2%
4354854 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 42.0 3.73e-01 77.1% 55.2%
3220665 4014.1.1.1 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV 0.58 43.0 3.74e-01 79.8% 49.7%
5020267 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 47.0 4.35e-01 100.0% 69.6%
4300927 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 42.0 4.13e-01 75.2% 77.4%
3650337 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.58 37.0 3.48e-01 81.7% 53.1%
3829402 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 41.0 4.62e-01 76.1% 100.0%
3826658 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 41.0 4.51e-01 74.3% 100.0%
3815383 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 40.0 4.48e-01 73.4% 100.0%
3429644 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 41.0 3.67e-01 76.1% 56.2%
3367405 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.57 41.0 4.17e-01 76.1% 85.5%
3308135 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 42.0 4.54e-01 78.9% 97.8%
3643150 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 40.0 4.37e-01 72.5% 100.0%
3382396 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 41.0 4.54e-01 77.1% 98.8%
3345132 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 40.0 4.02e-01 78.9% 71.3%
3822351 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 40.0 4.26e-01 78.0% 85.3%
3434168 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 40.0 4.10e-01 74.3% 80.0%
3956293 1.1.5.75 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 0.56 39.0 4.11e-01 82.6% 80.0%
3275169 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 52.0 4.73e-01 100.0% 78.6%
None 0.55 40.0 3.83e-01 78.0% 74.8%
3369059 206.1.1.72 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.55 44.0 3.15e-01 85.3% 37.8%
4930740 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.55 46.0 3.75e-01 91.7% 93.3%
4245606 304.8.1.98 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT3 0.55 40.0 3.64e-01 78.0% 65.2%
3302370 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 39.0 4.31e-01 74.3% 100.0%
3456962 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.54 39.0 4.24e-01 74.3% 98.8%
3367684 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.54 39.0 4.24e-01 74.3% 98.8%
3285931 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 39.0 3.87e-01 74.3% 73.9%
1018784 241.1.1.3 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.54 39.0 3.72e-01 76.1% 64.8%
3904790 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 4.32e-01 76.1% 100.0%
3937491 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 3.88e-01 85.3% 90.4%
3306325 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.52 38.0 4.06e-01 76.1% 92.2%
5029881 310.3.1.26 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HVO_2525_N 0.52 44.0 4.04e-01 95.4% 91.0%
D2 high residues 226-448
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01520.24 best Amidase_3 172.3 1.50e-50 97.3% 99.4%