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MK813941.1__QEG08735.1__X__00020

Bact-Vir

MK813941.1__QEG08735.1__X__00020

Identity

Accession:
MK813941 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-52
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6w0pA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.79 47.0 2.74e-01 80.4% 7.2%
1h54A03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.74 51.0 4.50e-01 98.0% 50.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.73 47.0 3.51e-01 82.4% 26.8%
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.71 56.0 4.71e-01 96.1% 50.6%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.70 51.0 3.18e-01 76.5% 88.2%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.70 49.0 4.45e-01 98.0% 55.1%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.67 49.0 3.08e-01 76.5% 86.7%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.66 47.0 2.94e-01 74.5% 86.2%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 58.0 3.50e-01 100.0% 28.7%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 46.0 2.96e-01 74.5% 30.9%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.34e-01 100.0% 90.4%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 48.0 3.89e-01 82.4% 66.7%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 3.72e-01 88.2% 82.9%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 49.0 3.05e-01 88.2% 49.7%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.63 44.0 2.87e-01 74.5% 88.3%
1rfmA02 3.30.1370.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.63 43.0 2.86e-01 82.4% 17.5%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 53.0 4.06e-01 96.1% 94.1%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 52.0 3.06e-01 100.0% 34.0%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.62 49.0 3.64e-01 98.0% 33.6%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.62 54.0 3.99e-01 100.0% 64.4%
7vljA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 51.0 4.30e-01 96.1% 55.9%
6fndA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 51.0 3.51e-01 94.1% 28.0%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.61 49.0 3.99e-01 98.0% 68.8%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 51.0 3.98e-01 96.1% 94.8%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.61 48.0 3.74e-01 90.2% 41.5%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 51.0 4.23e-01 96.1% 85.7%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 3.95e-01 100.0% 85.0%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 50.0 3.91e-01 98.0% 92.4%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 50.0 3.80e-01 92.2% 42.5%
2lstA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 42.0 3.23e-01 76.5% 81.5%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.60 49.0 3.84e-01 96.1% 93.3%
7r8iA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 48.0 3.20e-01 92.2% 84.3%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 43.0 2.78e-01 78.4% 19.0%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 49.0 3.73e-01 96.1% 86.5%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.59 42.0 3.67e-01 76.5% 53.8%
1h8mA00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.58 46.0 3.34e-01 86.3% 35.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.58 48.0 3.65e-01 92.2% 41.7%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 42.0 2.79e-01 76.5% 22.6%
7essA01 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.58 46.0 3.58e-01 96.1% 90.9%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 43.0 3.53e-01 84.3% 59.0%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.57 43.0 3.49e-01 90.2% 86.3%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.57 47.0 3.32e-01 100.0% 87.8%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 37.0 3.20e-01 78.4% 43.6%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.57 38.0 3.13e-01 96.1% 35.9%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.56 47.0 3.00e-01 100.0% 39.0%
1cqaA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 47.0 3.60e-01 96.1% 95.9%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.56 49.0 3.56e-01 100.0% 60.0%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.56 42.0 3.11e-01 82.4% 43.9%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.55 44.0 3.54e-01 96.1% 61.5%
1vybA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.53 42.0 2.84e-01 96.1% 21.2%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.19e-01 88.2% 80.6%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.53 45.0 3.66e-01 98.0% 77.0%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 39.0 3.19e-01 84.3% 50.9%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.53 44.0 3.46e-01 100.0% 90.2%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 42.0 3.08e-01 100.0% 36.3%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 40.0 3.18e-01 90.2% 86.7%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 42.0 3.00e-01 98.0% 41.9%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 41.0 3.10e-01 92.2% 43.6%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3783714 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.79 64.0 5.57e-01 94.1% 60.0%
4970248 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.72 60.0 3.94e-01 100.0% 22.3%
1171964 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.70 47.0 4.57e-01 82.4% 62.1%
5014688 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 48.0 4.73e-01 82.4% 69.1%
3933159 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 59.0 3.57e-01 98.0% 21.9%
3508531 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.65 43.0 4.38e-01 74.5% 70.0%
3519046 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.65 54.0 4.14e-01 94.1% 90.0%
5006876 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 53.0 4.21e-01 96.1% 90.3%
3699801 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 50.0 3.79e-01 92.2% 92.9%
5049789 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 49.0 3.71e-01 84.3% 76.8%
4879215 3270.1.1.1 a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.64 44.0 3.58e-01 100.0% 38.9%
5035465 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.63 53.0 4.15e-01 96.1% 94.8%
4976967 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 51.0 3.67e-01 90.2% 70.0%
3341742 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 50.0 3.47e-01 86.3% 61.3%
4046638 5.1.3.154 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 0.62 55.0 3.28e-01 98.0% 95.8%
4029539 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 52.0 4.09e-01 100.0% 88.3%
3475200 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.62 53.0 4.02e-01 100.0% 93.1%
4978622 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 47.0 3.77e-01 82.4% 89.0%
3240133 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.62 54.0 3.41e-01 100.0% 42.2%
5072430 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.62 52.0 3.91e-01 96.1% 86.2%
5013176 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.61 49.0 4.33e-01 88.2% 74.7%
5074649 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 46.0 3.49e-01 82.4% 76.8%
4975639 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 51.0 3.86e-01 96.1% 93.8%
4182580 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.61 53.0 3.99e-01 100.0% 96.2%
3490881 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.61 50.0 3.88e-01 96.1% 87.9%
3738165 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.60 52.0 3.97e-01 100.0% 92.0%
4947581 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 46.0 3.68e-01 86.3% 87.3%
5050910 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 48.0 3.85e-01 96.1% 95.7%
5049690 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 47.0 3.61e-01 96.1% 81.4%
5048715 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 48.0 3.55e-01 96.1% 77.9%
4945229 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 46.0 3.63e-01 90.2% 97.5%
5045239 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 48.0 3.65e-01 96.1% 81.5%
3736764 3711.1.1.0 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.58 51.0 3.50e-01 98.0% 52.2%
4244036 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 52.0 3.63e-01 98.0% 91.6%
4968485 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.58 50.0 3.09e-01 100.0% 20.1%
3840290 2.1.1.22 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.58 44.0 3.60e-01 82.4% 54.5%
3739908 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 45.0 3.15e-01 88.2% 39.4%
4977806 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 50.0 3.74e-01 100.0% 66.2%
3784589 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.57 43.0 3.07e-01 86.3% 32.4%
4249934 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.57 52.0 3.86e-01 100.0% 97.5%
5050157 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.56 49.0 3.56e-01 100.0% 90.7%
4944998 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 46.0 3.61e-01 100.0% 71.2%
5036974 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 46.0 3.81e-01 100.0% 82.7%
4929825 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 43.0 3.41e-01 90.2% 84.0%
5045187 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.54 43.0 3.38e-01 90.2% 53.9%
5005273 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 39.0 3.35e-01 80.4% 61.4%
4979423 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 40.0 3.19e-01 92.2% 81.5%
4943092 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 40.0 3.05e-01 84.3% 42.2%
4945712 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.50e-01 100.0% 67.2%
3980114 3860.1.1.158 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE 0.50 43.0 3.17e-01 100.0% 54.7%