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MK813941.1__QEG08929.1__X__00214
Bact-VirMK813941.1__QEG08929.1__X__00214
Identity
- Accession:
- MK813941 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Taxonomy
TaxID: 2588520
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.74 | 50.0 | 3.47e-01 | 70.8% | 28.8% |
| 2pexA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 3.43e-01 | 81.2% | 24.3% |
| 1biqA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.72 | 50.0 | 2.92e-01 | 70.8% | 11.2% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 4.39e-01 | 100.0% | 58.9% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.61 | 47.0 | 3.50e-01 | 87.5% | 33.6% |
| 4xhpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 51.0 | 3.48e-01 | 95.8% | 47.3% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 53.0 | 4.38e-01 | 100.0% | 84.7% |
| 1r6zA03 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.59 | 41.0 | 3.10e-01 | 75.0% | 42.1% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 52.0 | 3.98e-01 | 100.0% | 44.0% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 52.0 | 4.21e-01 | 100.0% | 80.0% |
| 4p63D00 | 3.40.910.10 | Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase | 0.58 | 46.0 | 2.87e-01 | 100.0% | 14.4% |
| 6opmD01 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.57 | 52.0 | 3.26e-01 | 100.0% | 20.2% |
| 2gsqA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 40.0 | 3.40e-01 | 83.3% | 41.5% |
| 6dftJ00 | 3.40.910.10 | Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase | 0.56 | 47.0 | 2.90e-01 | 100.0% | 14.9% |
| 4inaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 45.0 | 3.07e-01 | 95.8% | 55.8% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.48e-01 | 100.0% | 38.8% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.53 | 45.0 | 3.00e-01 | 91.7% | 59.1% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 46.0 | 3.66e-01 | 100.0% | 51.7% |
| 6u4mA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.51 | 36.0 | 3.46e-01 | 85.4% | 96.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4056248 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 51.0 | 3.65e-01 | 89.6% | 27.4% |
| 3737536 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.61 | 46.0 | 2.85e-01 | 95.8% | 13.4% |
| 4008585 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.61 | 46.0 | 3.73e-01 | 100.0% | 43.3% |
| 3605428 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.59 | 53.0 | 3.36e-01 | 97.9% | 21.8% |
| 4973586 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.59 | 47.0 | 3.30e-01 | 91.7% | 69.4% |
| 5010521 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.59 | 52.0 | 4.08e-01 | 100.0% | 85.0% |
| 4978597 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.59 | 52.0 | 3.47e-01 | 100.0% | 25.9% |
| 4337722 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.58 | 34.0 | 2.88e-01 | 85.4% | 31.8% |
| 3969371 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 49.0 | 4.04e-01 | 100.0% | 80.0% |
| 3187789 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.56 | 49.0 | 2.94e-01 | 97.9% | 83.9% |