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MK814750.1__QCG77011.1__SEA_EWALD_2__00002

Bact-Vir

MK814750.1__QCG77011.1__SEA_EWALD_2__00002

Identity

Accession:
MK814750 ↗
Kingdom:
phage

Quality

66.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nyceiraevirus› Gordonia_phage_Ewald

TaxID: 2572525

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-64
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h5uA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.58 39.0 2.53e-01 71.4% 88.8%
3fmwC03 3.40.30.120 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.56 45.0 3.81e-01 100.0% 72.8%
6brdA03 3.40.30.120 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.54 46.0 3.98e-01 100.0% 72.6%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 39.0 4.14e-01 82.1% 100.0%
6zbyD01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.54 37.0 2.45e-01 71.4% 92.3%
5epfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 46.0 3.41e-01 100.0% 85.1%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.51 40.0 3.26e-01 96.4% 82.2%
4grfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 39.0 3.13e-01 94.6% 90.0%
3eurA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 42.0 3.29e-01 100.0% 90.7%
3gl3D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 40.0 3.24e-01 100.0% 87.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4659422 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.57 38.0 3.72e-01 94.6% 65.0%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 41.0 4.14e-01 85.7% 92.7%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.70e-01 85.7% 73.0%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 36.0 3.32e-01 78.6% 55.3%
5033600 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 35.0 3.69e-01 76.8% 83.7%
1171960 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.51 38.0 3.48e-01 82.1% 91.0%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.62e-01 78.6% 80.0%