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MK817115.1__QDF13885.1__vBEcoMphAPEC6_gp260c__00254
Bact-VirMK817115.1__QDF13885.1__vBEcoMphAPEC6_gp260c__00254
Identity
- Accession:
- MK817115 ↗
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Taxonomy
TaxID: 2588085
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-60
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.61 | 36.0 | 3.93e-01 | 94.2% | 72.1% |
| 5dezA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 33.0 | 3.02e-01 | 100.0% | 36.5% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 43.0 | 2.76e-01 | 82.7% | 16.2% |
| 3g4eA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 42.0 | 2.70e-01 | 84.6% | 84.2% |
| 5h66A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.79e-01 | 80.8% | 48.1% |
| 2e9hA02 | 2.20.25.350 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 38.0 | 4.09e-01 | 96.2% | 86.4% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 42.0 | 2.62e-01 | 94.2% | 96.7% |
| 2olsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 39.0 | 2.98e-01 | 82.7% | 98.6% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 36.0 | 3.02e-01 | 78.8% | 44.4% |
| 4u3vA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 43.0 | 2.75e-01 | 92.3% | 52.9% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 38.0 | 3.01e-01 | 92.3% | 72.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3482420 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 37.0 | 4.47e-01 | 100.0% | 93.1% |
| 3641403 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.58 | 49.0 | 3.19e-01 | 100.0% | 27.3% |
| 2774534 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.57 | 40.0 | 2.79e-01 | 80.8% | 39.5% |
| 3465197 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 34.0 | 2.74e-01 | 94.2% | 28.6% |
| 3819869 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.56 | 34.0 | 2.83e-01 | 94.2% | 31.6% |
| 3900931 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.54 | 39.0 | 4.18e-01 | 76.9% | 93.3% |
| 4960549 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 37.0 | 3.76e-01 | 98.1% | 74.0% |
| 3356274 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.54 | 34.0 | 2.80e-01 | 96.2% | 32.6% |
| 3381974 | 2003.1.2.47 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C | 0.54 | 37.0 | 2.49e-01 | 75.0% | 16.9% |
| 3612883 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.53 | 37.0 | 3.99e-01 | 75.0% | 86.7% |
| None | — | 0.53 | 46.0 | 2.87e-01 | 100.0% | 25.9% | |
| 3275971 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.53 | 46.0 | 2.79e-01 | 100.0% | 34.4% |
| 3961261 | 5.1.4.471 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NHL | 0.52 | 44.0 | 2.97e-01 | 100.0% | 24.5% |
| 3261599 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.51 | 41.0 | 2.91e-01 | 100.0% | 35.3% |
| 3957008 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.51 | 44.0 | 3.12e-01 | 100.0% | 32.4% |