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MK843319.1__QCW20877.1__WG69_0024__00024

Bact-Vir

MK843319.1__QCW20877.1__WG69_0024__00024

Identity

Accession:
MK843319 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Waukeshavirus› Bacillus_phage_vB_BthS-TP21T

TaxID: 2582416

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-198
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1td6A03 1.10.472.40 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 0.62 28.0 3.45e-01 94.4% 65.2%
2rh3A00 1.10.1220.190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › VirC2, RHH domain 0.61 48.0 5.13e-01 94.4% 99.2%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 27.0 3.79e-01 90.1% 92.4%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.56 21.0 3.26e-01 83.1% 91.7%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.56 26.0 3.34e-01 81.7% 75.9%
2axyA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 28.0 3.87e-01 90.8% 97.2%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 31.0 3.80e-01 94.4% 87.6%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.54 26.0 2.90e-01 94.4% 55.5%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 29.0 3.76e-01 91.5% 93.7%
2mzwA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 26.0 3.35e-01 90.1% 86.8%
1iyhB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 35.0 3.91e-01 81.0% 90.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4373529 101.1.11.43 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY 0.80 55.0 6.43e-01 95.8% 100.0%
2504481 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.74 63.0 5.93e-01 90.1% 90.0%
3629670 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.55 32.0 3.72e-01 92.3% 78.1%
3661545 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.55 32.0 3.77e-01 93.0% 82.0%
3667682 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.53 30.0 3.57e-01 92.3% 83.2%
3773086 109.4.1.103 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GLE1 0.52 38.0 2.97e-01 76.8% 37.2%
5050323 3962.1.1.0 ↗ alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit 0.51 36.0 3.63e-01 71.8% 88.3%
D2 medium residues 7-56
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8d7hD01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 47.0 3.40e-01 98.0% 42.8%
1ezjA01 1.10.287.320 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Viral phosphoprotein oligmorisation site domain 0.56 48.0 4.46e-01 94.0% 85.5%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 33.0 2.81e-01 70.0% 33.0%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.38e-01 90.0% 85.4%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4009408 639.2.1.1 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.80 55.0 4.93e-01 72.0% 57.4%
3948672 639.2.1.1 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.78 54.0 5.24e-01 72.0% 76.4%
3977558 639.2.1.3 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › BDM 0.78 54.0 5.19e-01 72.0% 69.1%
3609997 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.76 51.0 3.20e-01 70.0% 25.4%
4933335 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.76 52.0 4.40e-01 72.0% 71.2%
3725620 109.3.1.217 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7791 0.76 53.0 3.15e-01 74.0% 18.0%
3731082 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.73 50.0 4.34e-01 72.0% 72.0%
4472405 3704.1.1.0 ↗ alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain 0.61 52.0 3.64e-01 100.0% 45.6%
3713379 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.60 49.0 3.08e-01 98.0% 28.1%