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MK867354.2__QFG06361.1__SSCSM1_104__00104

Bact-Vir

MK867354.2__QFG06361.1__SSCSM1_104__00104

Identity

Accession:
MK867354 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Zhoulongquanvirus› Synechococcus_phage_S-SCSM1

TaxID: 2588487

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-98_219-230
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v8qB00 6.20.250.60 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.64 33.0 3.67e-01 86.7% 60.3%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 30.0 4.11e-01 74.4% 100.0%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 34.0 2.96e-01 73.3% 32.4%
4blqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 34.0 2.40e-01 71.1% 18.7%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.51 39.0 3.41e-01 84.4% 75.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3950208 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.52 29.0 3.34e-01 84.4% 75.4%
3599172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 28.0 3.18e-01 85.6% 72.3%
2958186 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 31.0 3.75e-01 90.0% 100.0%
D2 medium residues 99-218
PDB
Domain cluster: rep: NC_015281.1__YP_004322707.1__SShM2_041__00041__D104-221
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bb6C00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.75 46.0 4.82e-01 98.3% 66.1%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.63 36.0 4.71e-01 72.5% 100.0%
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 39.0 4.27e-01 97.5% 74.5%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 39.0 4.29e-01 97.5% 76.8%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 38.0 4.43e-01 96.7% 88.6%
2vveA01 2.60.120.770 Mainly Beta › Sandwich › Jelly Rolls › 0.58 35.0 3.85e-01 85.8% 74.2%
2oyzA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 38.0 4.23e-01 97.5% 85.1%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 38.0 4.01e-01 97.5% 75.5%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 41.0 4.37e-01 96.7% 83.5%
2vpvA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 38.0 4.23e-01 88.3% 88.3%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 37.0 4.16e-01 97.5% 87.4%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 43.0 4.37e-01 96.7% 82.5%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 40.0 4.28e-01 97.5% 87.5%
2y0oA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 49.0 4.33e-01 97.5% 84.2%
3zhnA00 2.60.40.4150 Mainly Beta › Sandwich › Immunoglobulin-like › Type VI secretion system, lipoprotein SciN 0.54 40.0 3.96e-01 78.3% 92.4%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 4.31e-01 97.5% 82.0%
1y9qA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 39.0 4.31e-01 87.5% 95.7%
2lgnA00 2.60.40.2850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 29.0 3.68e-01 78.3% 93.9%
6v46A02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.52 46.0 3.73e-01 95.8% 64.6%
4lejA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 40.0 3.53e-01 98.3% 57.4%
1hgeA01 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.51 45.0 3.71e-01 95.8% 65.3%
3m5gA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.51 45.0 3.76e-01 95.8% 64.9%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.99e-01 100.0% 84.5%
4h32A02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.50 43.0 3.59e-01 95.8% 63.2%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3579524 10.12.1.15 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ARD 0.75 40.0 4.43e-01 95.8% 64.0%
3213521 10.12.1.25 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH 0.64 52.0 5.40e-01 85.8% 91.8%
3987543 10.12.1.18 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DUF386 0.63 44.0 4.07e-01 86.7% 57.3%
5021913 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 32.0 3.61e-01 70.8% 63.3%
5040310 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 46.0 4.72e-01 85.8% 82.6%
3674650 10.12.1.9 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC 0.61 49.0 4.51e-01 85.8% 68.4%
3490022 10.32.1.184 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_II 0.61 39.0 3.68e-01 86.7% 52.0%
4962366 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.60 45.0 4.58e-01 97.5% 80.9%
164729 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.59 39.0 4.17e-01 97.5% 75.5%
3962882 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.58 52.0 3.62e-01 98.3% 46.8%
4929162 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 49.0 4.75e-01 96.7% 82.3%
3969412 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.57 40.0 4.09e-01 97.5% 73.9%
3252660 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 42.0 4.42e-01 98.3% 84.5%
4927710 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 37.0 4.05e-01 97.5% 79.0%
3973477 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 39.0 4.07e-01 98.3% 74.6%
5017936 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 41.0 4.20e-01 95.8% 78.3%
3973252 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 40.0 4.11e-01 97.5% 77.2%
4284515 10.12.1.5 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.55 39.0 4.29e-01 95.8% 89.0%
4967716 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 37.0 4.05e-01 85.8% 88.4%
1329 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 39.0 4.24e-01 96.7% 89.9%
3520278 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 43.0 3.82e-01 85.8% 69.1%
4662228 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 42.0 4.16e-01 97.5% 76.9%
5018960 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 41.0 4.05e-01 96.7% 76.8%
3587816 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 37.0 4.01e-01 97.5% 83.8%
3992449 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.53 41.0 3.92e-01 85.0% 70.3%
5043306 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 34.0 3.86e-01 75.8% 88.9%
3269233 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 4.34e-01 97.5% 90.0%
3497743 10.12.1.5 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.50 45.0 4.15e-01 98.3% 90.3%