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MK882925.1__QDF14280.1__vBDshSR4C_032__00032
Bact-VirMK882925.1__QDF14280.1__vBDshSR4C_032__00032
Identity
- Accession:
- MK882925 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 2590919
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-84
Domain cluster:
rep: MZ836210.1__UAW06887.1__X__00073__D3-69
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 51.0 | 5.43e-01 | 77.6% | 76.1% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 58.0 | 5.96e-01 | 81.6% | 88.9% |
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 50.0 | 5.39e-01 | 77.6% | 85.7% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.69 | 46.0 | 4.93e-01 | 89.5% | 81.5% |
| 3ezqA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.67 | 59.0 | 5.20e-01 | 100.0% | 76.5% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.65 | 47.0 | 3.60e-01 | 84.2% | 32.6% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 45.0 | 4.64e-01 | 78.9% | 81.4% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 36.0 | 3.66e-01 | 82.9% | 59.5% |
| 1r4gA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.60 | 40.0 | 4.60e-01 | 90.8% | 98.1% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.60 | 46.0 | 4.22e-01 | 85.5% | 93.3% |
| 7jpxA02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.60 | 47.0 | 4.03e-01 | 85.5% | 81.0% |
| 2lhiA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 45.0 | 3.45e-01 | 82.9% | 54.0% |
| 3c4rA00 | 1.10.3600.10 | Mainly Alpha › Orthogonal Bundle › uncharacterized protein encoded by cryptic prophage fold › Putative bacterial toxin ydaT | 0.56 | 46.0 | 4.05e-01 | 97.4% | 91.1% |
| 4annA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 37.0 | 2.92e-01 | 71.1% | 32.4% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 43.0 | 3.95e-01 | 86.8% | 67.0% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 39.0 | 3.56e-01 | 80.3% | 91.7% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 46.0 | 3.19e-01 | 97.4% | 53.4% |
| 7x4eA01 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.52 | 42.0 | 3.80e-01 | 89.5% | 100.0% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 36.0 | 3.00e-01 | 72.4% | 55.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.83 | 61.0 | 6.82e-01 | 86.8% | 98.3% | |
| 4935348 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 63.0 | 6.27e-01 | 93.4% | 77.5% |
| 3589590 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 56.0 | 6.21e-01 | 86.8% | 96.7% |
| 3946838 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 55.0 | 5.56e-01 | 84.2% | 76.0% |
| 4971248 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.74 | 57.0 | 5.88e-01 | 88.2% | 88.6% |
| 4946761 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.68 | 50.0 | 5.17e-01 | 81.6% | 84.3% |
| 4963279 | 101.1.4.92 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF5791 | 0.64 | 48.0 | 5.03e-01 | 84.2% | 91.3% |
| 1108268 | 3770.1.1.1 ↗ | alpha arrays › Flax-rust effector AvrM › Flax-rust effector AvrM › Flax-rust effector AvrM › AvrM-A | 0.62 | 44.0 | 3.63e-01 | 75.0% | 61.4% |
| 2866801 | 108.2.1.0 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins | 0.62 | 49.0 | 3.90e-01 | 86.8% | 57.8% |
| 3598 | 632.3.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › Paramyxo_P | 0.60 | 40.0 | 4.60e-01 | 90.8% | 98.1% |
| 4138362 | 2004.1.1.491 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, RsgA_GTPase | 0.59 | 42.0 | 2.95e-01 | 75.0% | 82.9% |
| 3888994 | 601.19.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein | 0.59 | 49.0 | 3.91e-01 | 89.5% | 92.4% |
| 3965831 | 101.1.3.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF772 | 0.58 | 46.0 | 3.88e-01 | 84.2% | 65.8% |
| 4523817 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.57 | 45.0 | 3.32e-01 | 85.5% | 32.8% |
| 4952220 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.56 | 51.0 | 4.49e-01 | 100.0% | 93.6% |
| 3964125 | 101.1.1.248 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF772 | 0.56 | 45.0 | 3.80e-01 | 86.8% | 65.6% |
| 5009203 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 36.0 | 3.96e-01 | 96.1% | 85.0% |
| 3888928 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.55 | 48.0 | 4.75e-01 | 100.0% | 91.3% |
| 3597141 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 49.0 | 3.52e-01 | 100.0% | 44.3% |
| 3481256 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 39.0 | 3.53e-01 | 78.9% | 75.2% |
| 3656648 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.51 | 40.0 | 2.99e-01 | 85.5% | 72.5% |