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QDP52177.1

Arc-Vir

MK892597__QDP52177.1__Unbinned2902contig1001-19__00020

Identity

Accession:
MK892597 ↗
Protein ID:
QDP52177.1 ↗
Kingdom:
archaea

Quality

60.2 mean pLDDT

Taxonomy

Prokaryotic_dsDNA_virus_sp.

TaxID: 2591644

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-116
PDB
Domain cluster: rep: ON191531.1__URG17458.1__Mbo2_088__00088__D20-99
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 55.0 5.74e-01 81.7% 76.3%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 59.0 5.69e-01 87.8% 72.8%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 60.0 6.37e-01 87.8% 95.8%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 59.0 6.27e-01 92.7% 94.4%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.96e-01 85.4% 96.8%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 60.0 6.34e-01 100.0% 98.6%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.73 51.0 5.67e-01 80.5% 93.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 52.0 5.88e-01 85.4% 96.8%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 51.0 5.79e-01 87.8% 98.4%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.71 45.0 5.26e-01 74.4% 92.9%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.59e-01 85.4% 92.4%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.70 58.0 5.55e-01 89.0% 89.5%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 48.0 4.90e-01 95.1% 73.8%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 4.84e-01 81.7% 80.0%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.74e-01 84.1% 100.0%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 4.27e-01 87.8% 45.7%
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 4.65e-01 84.1% 78.4%
2db9A01 3.90.70.200 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain 0.66 53.0 4.44e-01 85.4% 59.4%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 50.0 4.60e-01 82.9% 91.6%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 49.0 3.70e-01 82.9% 47.3%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 49.0 4.47e-01 85.4% 86.8%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 45.0 4.23e-01 82.9% 85.6%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.59 51.0 4.95e-01 100.0% 87.1%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 45.0 4.20e-01 81.7% 75.2%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.58 52.0 4.11e-01 100.0% 72.4%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.58 32.0 3.58e-01 73.2% 68.3%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.57 48.0 4.08e-01 97.6% 89.9%
4aw8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.74e-01 95.1% 78.0%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.56 41.0 3.50e-01 76.8% 88.1%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 46.0 2.92e-01 92.7% 38.3%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.55 49.0 3.96e-01 100.0% 85.9%
4w78G00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 39.0 3.18e-01 75.6% 97.5%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 40.0 2.79e-01 79.3% 35.2%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 3.36e-01 90.2% 77.0%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 43.0 3.42e-01 85.4% 67.3%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 43.0 4.00e-01 87.8% 71.8%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 43.0 3.65e-01 90.2% 87.4%
4qhzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 42.0 3.16e-01 91.5% 75.3%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 44.0 4.09e-01 95.1% 75.2%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 37.0 3.47e-01 79.3% 84.1%
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.39e-01 81.7% 73.6%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.76e-01 84.1% 35.8%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 35.0 2.88e-01 73.2% 73.4%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3410370 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 62.0 6.72e-01 87.8% 95.7%
3550699 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.80 61.0 5.80e-01 84.1% 69.5%
3928136 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 54.0 6.28e-01 85.4% 98.3%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.77 55.0 6.09e-01 85.4% 93.8%
3416672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 59.0 5.50e-01 87.8% 67.0%
4041586 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.76 54.0 6.05e-01 86.6% 93.8%
3441143 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.76 58.0 5.43e-01 91.5% 66.0%
4292289 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.75 53.0 5.85e-01 85.4% 92.3%
3886492 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.74 57.0 5.94e-01 86.6% 88.0%
4101580 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 54.0 5.97e-01 87.8% 95.4%
4419948 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 53.0 5.88e-01 85.4% 93.8%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 54.0 5.98e-01 87.8% 95.4%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 53.0 5.94e-01 85.4% 93.8%
3934278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.25e-01 85.4% 62.6%
3347795 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.74 58.0 5.94e-01 96.3% 85.0%
3267804 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 61.0 5.71e-01 89.0% 95.0%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 53.0 5.91e-01 85.4% 93.8%
4104219 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 52.0 5.80e-01 85.4% 93.8%
3931053 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.73 59.0 5.49e-01 85.4% 97.0%
4051625 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 52.0 5.85e-01 86.6% 93.8%
4201878 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 52.0 5.86e-01 86.6% 93.8%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 53.0 5.92e-01 87.8% 95.4%
3599172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.91e-01 87.8% 95.4%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 53.0 5.88e-01 86.6% 95.4%
4446791 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 51.0 5.69e-01 85.4% 92.3%
4135259 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 53.0 5.82e-01 85.4% 95.4%
4524363 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 52.0 5.79e-01 86.6% 93.8%
3713569 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 4.93e-01 85.4% 62.3%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 53.0 5.90e-01 87.8% 95.4%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 51.0 5.64e-01 85.4% 92.3%
4086925 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 51.0 5.64e-01 85.4% 92.3%
4040055 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.72 46.0 5.27e-01 75.6% 91.4%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 53.0 5.90e-01 87.8% 96.9%
3590827 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 52.0 5.75e-01 87.8% 95.4%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 57.0 5.97e-01 91.5% 92.0%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 52.0 5.71e-01 87.8% 95.4%
3631731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 59.0 4.78e-01 89.0% 62.7%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 51.0 5.59e-01 85.4% 92.4%
4618633 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.71 45.0 5.20e-01 74.4% 89.8%
4235293 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 4.89e-01 82.9% 80.0%
5045554 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.70 59.0 5.13e-01 89.0% 80.7%
3184389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 4.60e-01 91.5% 54.3%
3707121 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.73e-01 82.9% 96.0%
3950208 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 50.0 5.54e-01 87.8% 95.4%
3659671 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.69 51.0 5.52e-01 91.5% 92.9%
3828614 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.68 59.0 5.27e-01 91.5% 81.8%
3251420 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.21e-01 85.4% 76.7%
4993118 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.67 48.0 4.79e-01 78.0% 71.8%
3969410 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.67 48.0 4.20e-01 74.4% 58.0%
3540253 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.66 53.0 5.10e-01 86.6% 74.7%
3782050 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.66 54.0 4.55e-01 87.8% 60.0%
140973 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.65 50.0 3.63e-01 81.7% 42.3%
2755606 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.64 57.0 4.11e-01 100.0% 34.8%
3477401 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.64 57.0 4.02e-01 100.0% 32.7%
3575581 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.64 57.0 4.48e-01 100.0% 48.5%
3821287 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.63 56.0 4.67e-01 100.0% 57.1%
3907176 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.63 50.0 4.84e-01 85.4% 86.7%
4015826 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 3.91e-01 80.5% 98.6%
3255737 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.62 55.0 4.86e-01 97.6% 89.2%
4063634 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 55.0 4.76e-01 100.0% 64.5%
4024274 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 54.0 4.98e-01 100.0% 75.2%
4674170 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 56.0 4.86e-01 100.0% 67.5%
3251896 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.61 54.0 4.81e-01 97.6% 88.7%
3545090 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.60 46.0 3.38e-01 81.7% 43.6%
3772106 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.60 46.0 3.34e-01 81.7% 42.7%
4932514 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.58 47.0 4.22e-01 91.5% 86.7%
3486847 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.57 43.0 3.98e-01 82.9% 62.9%
5052232 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.56 49.0 3.16e-01 96.3% 40.4%
4162584 220.1.1.67 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.54 41.0 3.31e-01 80.5% 56.2%
3487081 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 41.0 3.86e-01 82.9% 66.0%
3956586 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.54 45.0 3.28e-01 95.1% 53.3%
3648276 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.53 42.0 3.73e-01 87.8% 68.8%
3899014 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.53 43.0 3.26e-01 93.9% 60.9%
5023617 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.52 44.0 3.70e-01 91.5% 57.8%
4931484 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.50 43.0 3.23e-01 100.0% 36.4%