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QDP61640.1

Arc-Vir

MK892760__QDP61640.1__Unbinned8261contig1001-13__00014

Identity

Accession:
MK892760 ↗
Protein ID:
QDP61640.1 ↗
Kingdom:
archaea

Quality

81.1 mean pLDDT

Taxonomy

Prokaryotic_dsDNA_virus_sp.

TaxID: 2591644

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-90
PDB
Domain cluster: rep: MK804892.1__QDJ96119.1__4D05_006__00006__D161-266
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.85 59.0 6.08e-01 81.7% 75.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 51.0 5.84e-01 72.0% 88.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 48.0 5.80e-01 78.0% 96.3%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.75 50.0 5.70e-01 75.6% 93.3%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.75 58.0 4.66e-01 81.7% 66.2%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 53.0 5.15e-01 89.0% 70.0%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.71 58.0 4.73e-01 86.6% 69.9%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.69 63.0 4.50e-01 100.0% 70.5%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.66 52.0 5.36e-01 82.9% 93.7%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.50e-01 87.8% 79.2%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.64 45.0 4.40e-01 75.6% 69.9%
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.63 43.0 4.29e-01 72.0% 88.5%
3kw2A01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.61 29.0 3.18e-01 89.0% 51.5%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 39.0 4.36e-01 98.8% 87.7%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 40.0 4.06e-01 100.0% 76.2%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.56 39.0 3.61e-01 74.4% 81.5%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 43.0 3.55e-01 85.4% 81.8%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 39.0 3.38e-01 82.9% 90.0%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3174977 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.88 61.0 5.73e-01 81.7% 61.1%
5052257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 52.0 5.95e-01 74.4% 88.3%
3505947 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.80 55.0 4.79e-01 70.7% 82.5%
3999482 4.1.1.311 ↗ beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.78 56.0 5.01e-01 74.4% 82.7%
2553270 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.77 55.0 5.84e-01 74.4% 83.6%
3471772 4.1.1.311 ↗ beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.75 53.0 5.18e-01 74.4% 93.3%
3621303 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 52.0 4.35e-01 72.0% 57.7%
3599172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 48.0 5.37e-01 72.0% 84.6%
4051625 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 47.0 5.21e-01 75.6% 84.6%
3404157 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.69 58.0 4.79e-01 87.8% 78.5%
3915553 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.69 58.0 5.06e-01 89.0% 81.7%
3232054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 4.77e-01 84.1% 64.0%
3487453 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.67 57.0 4.84e-01 89.0% 77.6%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 47.0 4.25e-01 72.0% 56.4%
3848483 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.65 46.0 4.41e-01 75.6% 84.7%
3782050 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.64 52.0 4.36e-01 86.6% 57.8%
3862470 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.06e-01 75.6% 64.2%
3895974 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.63 53.0 4.38e-01 89.0% 73.6%
3487081 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.58e-01 89.0% 82.0%
3862290 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.59 42.0 3.45e-01 74.4% 69.0%
3855663 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.54 41.0 3.54e-01 81.7% 90.0%
6286 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.54 43.0 3.55e-01 85.4% 81.8%
3969377 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 36.0 3.74e-01 91.5% 78.4%
3484000 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 37.0 2.10e-01 80.5% 12.9%
3924550 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.51 43.0 3.57e-01 97.6% 80.0%