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QDP61648.1
Arc-VirMK892760__QDP61648.1__Unbinned8261contig1001-21__00022
Identity
- Accession:
- MK892760 ↗
- Protein ID:
- QDP61648.1 ↗
- Kingdom:
- archaea
Quality
91.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-121
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cp5A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.93 | 79.0 | 7.07e-01 | 94.4% | 68.1% |
| 2l4dA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.86 | 80.0 | 7.54e-01 | 100.0% | 84.9% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.66 | 35.0 | 3.82e-01 | 77.5% | 61.8% |
| 3mk7B02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.65 | 59.0 | 4.80e-01 | 100.0% | 84.6% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.63 | 33.0 | 3.64e-01 | 92.1% | 62.2% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 40.0 | 4.36e-01 | 100.0% | 86.1% |
| 2oyhA00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 31.0 | 3.57e-01 | 93.3% | 81.2% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 37.0 | 3.90e-01 | 100.0% | 82.3% |
| 1m6yA02 | 1.10.150.170 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative methyltransferase TM0872, insert domain | 0.51 | 35.0 | 3.34e-01 | 91.0% | 60.0% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.51 | 41.0 | 3.82e-01 | 92.1% | 74.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 169332 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.93 | 79.0 | 7.07e-01 | 94.4% | 68.1% |
| 3339561 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.63 | 33.0 | 3.23e-01 | 93.3% | 45.0% |
| 4453815 | 192.12.1.1 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Prok-TraM | 0.63 | 33.0 | 3.31e-01 | 94.4% | 48.4% |
| 3804939 | 192.2.1.3 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Rad50_zn_hook | 0.63 | 38.0 | 3.29e-01 | 92.1% | 38.6% |
| 3294437 | 5086.1.1.110 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA | 0.62 | 36.0 | 3.82e-01 | 93.3% | 65.0% |
| 3578256 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.60 | 35.0 | 3.96e-01 | 93.3% | 75.7% |
| 3471023 | 164.1.1.15 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › PPPI_inhib | 0.58 | 37.0 | 3.06e-01 | 71.9% | 35.0% |
| 3642639 | 3922.1.1.269 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook | 0.57 | 36.0 | 3.46e-01 | 92.1% | 54.3% |
| 3983042 | 3711.1.1.3 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Metal_resist | 0.57 | 32.0 | 3.28e-01 | 93.3% | 54.4% |
| 3354354 | 7515.1.1.0 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like | 0.56 | 49.0 | 3.48e-01 | 100.0% | 34.0% |
| 3309008 | 375.1.1.246 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rad50_zn_hook | 0.54 | 38.0 | 3.60e-01 | 93.3% | 61.0% |
| 3990854 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.52 | 36.0 | 3.67e-01 | 92.1% | 71.1% |
| 3253767 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.50 | 40.0 | 3.30e-01 | 93.3% | 48.4% |
| 3705890 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.50 | 38.0 | 3.73e-01 | 91.0% | 74.7% |