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QDP61667.1
Arc-VirMK892760__QDP61667.1__Unbinned8261contig1001-40__00041
Identity
- Accession:
- MK892760 ↗
- Protein ID:
- QDP61667.1 ↗
- Kingdom:
- archaea
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.64 | 51.0 | 4.73e-01 | 100.0% | 68.5% |
| 5mmjn01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 35.0 | 3.20e-01 | 94.1% | 47.2% |
| 2elhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 35.0 | 3.53e-01 | 95.6% | 69.7% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 33.0 | 3.23e-01 | 95.6% | 61.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053066 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.57 | 42.0 | 2.92e-01 | 77.9% | 83.0% |
| 4366103 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.56 | 47.0 | 3.46e-01 | 97.1% | 85.5% |
| 3502157 | 604.3.1.23 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › TAP42 | 0.56 | 39.0 | 3.31e-01 | 73.5% | 73.5% |
| 3815026 | 604.1.1.148 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N | 0.53 | 37.0 | 3.43e-01 | 88.2% | 57.6% |
| 4414196 | 7582.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 | 0.51 | 42.0 | 3.28e-01 | 98.5% | 86.3% |