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MK907247.1__QDJ99065.1__ACIGJGHJ_00067__00066
Bact-VirMK907247.1__QDJ99065.1__ACIGJGHJ_00067__00066
Identity
- Accession:
- MK907247 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Drexlerviridae›
Veterinaerplatzvirus›
Escherichia_phage_vB_EcoS-2006V
TaxID: 2576494
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 93-214
Domain cluster:
rep: IMGVR_UViG_3300039165_000002-3300039165-Ga0245639_000297_13617_16016__D341-392_603-697
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13148.12 best | DUF3987 | 39.1 | 7.80e-10 | 98.4% | 28.0% |
D2
high
residues 219-293
Domain cluster:
rep: KC542353.1__AGR46554.1__TW1_038__00038__D437-507
D3
medium
residues 12-61
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ifdE00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.55 | 45.0 | 2.93e-01 | 98.0% | 77.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3383958 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 42.0 | 2.59e-01 | 70.0% | 64.8% |
| 4937952 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.57 | 49.0 | 3.13e-01 | 100.0% | 81.5% |
| 4175050 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 40.0 | 3.12e-01 | 100.0% | 35.5% |
| 5050076 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.55 | 45.0 | 3.15e-01 | 100.0% | 85.0% |
| 5018095 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 2.80e-01 | 70.0% | 67.5% |
| 2037626 | 808.1.1.1 ↗ | a+b duplicates or obligate multimers › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › CoV_nucleocap | 0.53 | 37.0 | 2.89e-01 | 74.0% | 88.5% |
| 5075002 | 101.1.2.525 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7646 | 0.51 | 35.0 | 3.07e-01 | 80.0% | 74.7% |