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MK932884.1__QDF14869.1__X__00032

Bact-Vir

MK932884.1__QDF14869.1__X__00032

Identity

Accession:
MK932884 ↗
Kingdom:
phage

Quality

92.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bifidobacterium_phage_PMBT6

TaxID: 2576879

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-163
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 30.0 4.26e-01 82.9% 78.0%
2lquA01 1.20.1420.40 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Decorin-binding protein 0.67 41.0 4.20e-01 94.9% 61.7%
3ljbA00 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.62 58.0 5.15e-01 100.0% 78.1%
1jadA00 1.20.1230.10 Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain 0.62 53.0 4.52e-01 89.2% 93.0%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.59 26.0 3.30e-01 75.3% 68.5%
3wvoC02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.59 36.0 3.91e-01 77.2% 72.3%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 39.0 4.58e-01 82.9% 96.5%
1s2xA00 1.20.190.30 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ 0.57 43.0 4.17e-01 95.6% 69.4%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.56 38.0 4.54e-01 86.1% 99.1%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.56 37.0 4.29e-01 89.9% 93.8%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.56 37.0 4.40e-01 83.5% 100.0%
3edvA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 39.0 3.75e-01 86.1% 62.3%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.55 45.0 4.72e-01 93.0% 95.2%
2nwbA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 39.0 3.42e-01 74.7% 97.9%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.54 40.0 4.38e-01 89.2% 94.6%
7eq1R01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 44.0 3.64e-01 89.2% 50.0%
1f1mA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.53 44.0 4.40e-01 96.8% 87.0%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 39.0 4.24e-01 89.2% 93.3%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.51 31.0 3.82e-01 90.5% 95.9%
2jx0A00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 37.0 3.98e-01 98.7% 88.5%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 34.0 4.01e-01 96.8% 100.0%
3mfnB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 36.0 3.97e-01 96.2% 90.5%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 37.0 4.05e-01 93.0% 93.0%
1at9A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 44.0 3.93e-01 95.6% 79.6%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.50 26.0 3.36e-01 82.3% 94.9%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3636496 7022.1.1.1 ↗ alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.65 50.0 3.77e-01 78.5% 90.7%
4957380 1076.1.1.4 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease 0.63 46.0 3.71e-01 75.3% 90.8%
4999397 1075.5.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.63 46.0 4.27e-01 96.8% 60.0%
3610578 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.62 50.0 5.26e-01 98.7% 93.1%
3833812 604.39.1.15 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › DUF2232 0.62 38.0 3.77e-01 80.4% 57.7%
3841137 109.4.1.662 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MEKK4_N 0.62 45.0 3.98e-01 74.1% 76.4%
3209632 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.61 42.0 4.93e-01 88.0% 100.0%
3601528 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.61 48.0 3.83e-01 96.2% 41.2%
4981575 601.14.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.60 40.0 4.36e-01 88.6% 80.0%
5020679 1075.5.1.8 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 0.60 43.0 3.97e-01 94.9% 58.0%
3547408 604.1.1.153 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4455 0.59 50.0 4.62e-01 87.3% 83.1%
4018207 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.59 47.0 4.65e-01 91.1% 79.4%
5062721 1075.5.1.4 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt 0.59 43.0 4.04e-01 95.6% 61.0%
3735664 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.59 54.0 4.03e-01 99.4% 43.2%
4930955 7099.1.1.1 ↗ a+b complex topology › VP5 N-terminal domain › VP5 N-terminal domain › VP5 N-terminal domain › Viral_env_HRPV 0.58 48.0 3.81e-01 89.9% 89.2%
3740238 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.57 46.0 4.59e-01 98.7% 82.4%
4402843 604.1.1.20 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › AKNA 0.57 41.0 4.70e-01 83.5% 100.0%
4981592 1075.5.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.56 44.0 3.90e-01 98.7% 57.8%
4955893 109.10.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.56 39.0 3.59e-01 70.3% 75.6%
4970859 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.56 33.0 4.11e-01 85.4% 94.0%
5006471 5079.1.1.1 ↗ alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE 0.54 41.0 4.09e-01 91.1% 74.1%
3595892 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.54 41.0 3.41e-01 93.0% 46.8%
4501305 601.4.1.3 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_MCP_1 0.53 42.0 4.18e-01 96.8% 80.0%
3628755 109.4.1.1493 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle, ZW10_C, ZW10_C2 0.52 45.0 2.89e-01 91.8% 21.2%
4069075 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 48.0 3.52e-01 100.0% 89.4%
4512780 192.29.1.52 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Anthrone_oxy 0.52 46.0 4.48e-01 97.5% 89.4%
3265210 627.1.1.1 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 0.52 38.0 3.66e-01 76.6% 68.6%
3933426 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 22.0 2.78e-01 72.2% 62.1%
4983602 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.51 39.0 3.92e-01 78.5% 96.9%
5069603 601.18.1.30 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › Cytochrom_C_asm 0.51 35.0 3.94e-01 94.3% 90.4%
3685143 192.29.1.52 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Anthrone_oxy 0.51 44.0 4.36e-01 96.8% 89.7%
3498907 3615.1.1.1 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Fzo_mitofusin 0.50 47.0 3.87e-01 99.4% 67.0%
3611089 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 37.0 4.07e-01 98.1% 96.0%
D2 medium residues 164-272
PDB
Domain cluster: rep: KC661275.1__AGK87492.1__PBI_HINDER_13__00013__D189-335
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25310.2 best VG15 83.5 3.50e-23 74.3% 38.2%
D3 medium residues 307-364
PDB
Domain cluster: representative
D4 medium residues 365-433
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.68 40.0 4.19e-01 76.8% 65.6%
6hjfA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.66 52.0 3.91e-01 88.4% 34.1%
4gw9A02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 55.0 5.10e-01 97.1% 82.6%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 53.0 5.07e-01 94.2% 78.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.65 47.0 3.68e-01 89.9% 35.1%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 47.0 3.63e-01 76.8% 35.9%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 46.0 4.09e-01 75.4% 68.7%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.63 46.0 3.85e-01 78.3% 94.2%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.62 41.0 3.61e-01 100.0% 44.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 43.0 4.29e-01 84.1% 70.4%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.61 52.0 4.79e-01 97.1% 71.9%
2jheA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 52.0 4.51e-01 95.7% 69.4%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.61 51.0 4.06e-01 94.2% 84.2%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 50.0 4.09e-01 95.7% 67.4%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 46.0 3.96e-01 82.6% 56.6%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.60 47.0 4.59e-01 97.1% 76.6%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.60 50.0 4.41e-01 94.2% 99.0%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 42.0 3.78e-01 78.3% 69.4%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.58 49.0 4.66e-01 95.7% 81.0%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 41.0 3.23e-01 76.8% 60.6%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 46.0 3.82e-01 92.8% 73.9%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.57 42.0 3.33e-01 81.2% 87.5%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 45.0 4.48e-01 91.3% 84.5%
4hh2B03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 46.0 4.22e-01 98.6% 75.0%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 41.0 3.60e-01 81.2% 64.0%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.56 45.0 3.60e-01 89.9% 53.8%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.86e-01 89.9% 65.4%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.56 47.0 3.92e-01 97.1% 78.9%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.84e-01 85.5% 24.7%
2i52B00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.55 45.0 3.94e-01 95.7% 89.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 43.0 3.69e-01 89.9% 59.2%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.57e-01 94.2% 49.2%
3lh4A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.88e-01 94.2% 70.4%
1m53A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 39.0 3.84e-01 78.3% 100.0%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.54 40.0 3.29e-01 84.1% 40.7%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.53 41.0 2.76e-01 87.0% 20.2%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 43.0 3.08e-01 97.1% 78.8%
3nsjA02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 38.0 3.17e-01 78.3% 71.9%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.18e-01 89.9% 76.1%
6phxA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 39.0 3.57e-01 81.2% 98.9%
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 38.0 3.68e-01 79.7% 100.0%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 40.0 3.27e-01 87.0% 52.6%
3aj7A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 37.0 3.58e-01 73.9% 100.0%
2rqxA00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 42.0 4.02e-01 94.2% 91.4%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 43.0 3.02e-01 97.1% 82.9%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.50 43.0 4.07e-01 95.7% 90.5%
4oocA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.50 43.0 2.93e-01 97.1% 73.9%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.50 42.0 2.94e-01 100.0% 47.0%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3699929 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 60.0 4.52e-01 94.2% 69.4%
3595541 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 60.0 3.99e-01 94.2% 39.3%
4993341 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.70 55.0 5.48e-01 91.3% 82.9%
3703112 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 59.0 4.92e-01 94.2% 63.3%
3564163 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 51.0 3.09e-01 76.8% 29.2%
3697816 2008.1.1.99 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 0.69 53.0 3.95e-01 85.5% 46.2%
3168537 109.4.1.1794 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.67 50.0 3.10e-01 79.7% 26.7%
5082716 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.66 55.0 4.93e-01 94.2% 79.0%
4338527 5.1.5.145 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › eIF2A 0.66 49.0 2.97e-01 79.7% 18.9%
3548957 5.1.4.241 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A 0.66 49.0 2.99e-01 79.7% 19.6%
5017794 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.66 55.0 5.16e-01 97.1% 95.6%
3308699 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.66 54.0 4.74e-01 94.2% 87.3%
4930498 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 55.0 4.94e-01 95.7% 77.0%
4009799 274.1.1.4 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.65 53.0 4.71e-01 92.8% 61.9%
3881671 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.65 49.0 4.04e-01 79.7% 51.7%
5049953 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 56.0 5.14e-01 97.1% 92.2%
3596724 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 48.0 2.97e-01 79.7% 36.7%
4997576 223.1.1.27 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 0.65 53.0 4.64e-01 94.2% 90.0%
4010890 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 56.0 4.43e-01 98.6% 82.8%
3933016 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.64 52.0 3.37e-01 87.0% 29.5%
3932365 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.64 47.0 3.00e-01 78.3% 33.7%
3405033 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 47.0 2.99e-01 79.7% 26.2%
3591928 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 46.0 2.92e-01 78.3% 29.7%
4930969 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.63 53.0 5.20e-01 92.8% 85.3%
5067842 223.1.1.27 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 0.63 52.0 4.25e-01 95.7% 72.1%
3783089 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.63 45.0 3.75e-01 75.4% 63.3%
3977405 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.63 54.0 4.82e-01 97.1% 76.0%
3617770 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 46.0 3.41e-01 78.3% 30.8%
3964389 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.63 52.0 4.76e-01 95.7% 74.7%
4960081 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.62 52.0 4.68e-01 95.7% 80.0%
3781730 5.1.11.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller 0.62 46.0 2.89e-01 78.3% 32.2%
4945459 5.1.4.87 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD 0.62 47.0 3.06e-01 81.2% 29.9%
3588277 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.62 54.0 4.61e-01 98.6% 66.1%
3597697 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.62 53.0 3.83e-01 95.7% 49.0%
5077455 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.62 46.0 2.95e-01 79.7% 33.4%
4969909 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 55.0 4.30e-01 100.0% 75.3%
5048797 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.61 45.0 4.06e-01 88.4% 56.8%
4013354 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.61 52.0 3.49e-01 100.0% 50.3%
3225530 5.1.4.56 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.61 44.0 2.74e-01 78.3% 33.5%
3530304 2004.1.1.174 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 0.61 45.0 3.13e-01 78.3% 83.0%
4996485 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.60 46.0 3.14e-01 82.6% 44.6%
5051418 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 47.0 3.87e-01 88.4% 52.6%
3969970 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.60 42.0 4.12e-01 84.1% 66.7%
3394516 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.60 48.0 3.78e-01 87.0% 50.0%
3947082 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 49.0 4.48e-01 89.9% 68.9%
5080833 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.60 51.0 4.49e-01 98.6% 72.4%
3404871 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.59 41.0 3.53e-01 78.3% 45.5%
3781352 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 42.0 2.84e-01 75.4% 28.1%
3278725 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 50.0 3.26e-01 97.1% 29.6%
3233750 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.59 45.0 4.22e-01 84.1% 75.3%
4312097 295.1.1.15 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 0.58 42.0 3.13e-01 75.4% 84.6%
3219425 5.1.3.238 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.58 45.0 3.80e-01 91.3% 48.0%
3449739 207.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 0.58 40.0 2.51e-01 72.5% 17.1%
4459946 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.58 48.0 3.31e-01 94.2% 30.2%
4975626 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 42.0 3.34e-01 78.3% 53.1%
3283840 246.2.1.8 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PhoD 0.57 43.0 2.67e-01 82.6% 98.9%
3242288 2008.6.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains 0.57 46.0 3.48e-01 91.3% 35.0%
5014246 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.57 47.0 4.33e-01 97.1% 86.3%
5013243 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.57 47.0 4.40e-01 95.7% 88.9%
5038620 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 49.0 3.10e-01 98.6% 21.4%
3290541 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.56 39.0 4.05e-01 82.6% 78.5%
4632674 223.1.1.171 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_3-Cache_2 0.55 45.0 3.92e-01 95.7% 64.3%
3331262 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.54 38.0 3.50e-01 75.4% 54.7%
3550970 719.1.1.5 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.54 39.0 3.41e-01 78.3% 93.6%
71028 227.1.1.5 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_UL42 0.53 42.0 3.50e-01 89.9% 99.2%
4993093 316.1.1.18 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.53 39.0 2.57e-01 79.7% 39.2%
4156336 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.53 42.0 3.55e-01 92.8% 85.4%
4960403 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 42.0 3.82e-01 85.5% 74.4%
3484171 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 41.0 3.36e-01 94.2% 64.7%
4087213 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.52 37.0 3.71e-01 79.7% 81.3%
3289156 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 43.0 3.63e-01 97.1% 55.0%
5052205 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.51 41.0 2.40e-01 91.3% 59.1%