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MK932884.1__QDF14871.1__X__00034
Bact-VirMK932884.1__QDF14871.1__X__00034
Identity
- Accession:
- MK932884 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 107-169
Domain cluster:
rep: MW073100.1__QWT28898.1__vBMoxSR1_gp48__00048__D76-137
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 56.0 | 4.60e-01 | 73.0% | 57.1% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 54.0 | 4.43e-01 | 71.4% | 40.9% |
| 3x0uB01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.78 | 55.0 | 3.57e-01 | 73.0% | 24.3% |
| 2mh3A00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.75 | 52.0 | 5.01e-01 | 71.4% | 70.0% |
| 2a19A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.74 | 57.0 | 5.16e-01 | 82.5% | 88.2% |
| 3cymA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.68 | 48.0 | 3.79e-01 | 73.0% | 66.4% |
| 2l22A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.64 | 44.0 | 3.92e-01 | 71.4% | 50.5% |
| 3k7lA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.64 | 49.0 | 3.45e-01 | 82.5% | 78.7% |
| 4qozB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 42.0 | 2.87e-01 | 77.8% | 76.6% |
| 3gfvB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.56 | 44.0 | 3.21e-01 | 87.3% | 94.0% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.55 | 36.0 | 3.36e-01 | 71.4% | 53.1% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.53 | 36.0 | 3.24e-01 | 76.2% | 69.2% |
| 2iw3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 35.0 | 2.45e-01 | 73.0% | 74.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3990854 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.92 | 55.0 | 4.78e-01 | 92.1% | 43.3% |
| 4547274 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.86 | 61.0 | 5.07e-01 | 73.0% | 58.0% |
| 3963152 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.74 | 52.0 | 3.20e-01 | 73.0% | 19.1% |
| 4964878 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 54.0 | 5.25e-01 | 77.8% | 80.0% |
| 4961014 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.67 | 55.0 | 3.85e-01 | 90.5% | 47.1% |
| 4984419 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.67 | 54.0 | 3.59e-01 | 88.9% | 35.9% |
| 3933902 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 54.0 | 3.09e-01 | 95.2% | 10.3% |
| 3813837 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.65 | 48.0 | 4.54e-01 | 77.8% | 65.3% |
| 3594735 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 40.0 | 3.04e-01 | 100.0% | 26.0% |
| 3725843 | 144.1.1.5 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PLAC8 | 0.57 | 39.0 | 3.27e-01 | 71.4% | 50.9% |
| 4942351 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.53 | 42.0 | 2.92e-01 | 82.5% | 71.2% |