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MK937595.1__QDH92147.1__SEA_DUBU_42__00042

Bact-Vir

MK937595.1__QDH92147.1__SEA_DUBU_42__00042

Identity

Accession:
MK937595 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Dubuvirus› Streptomyces_phage_Dubu

TaxID: 2591226

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-95
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jx8A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.65 29.0 3.87e-01 71.6% 80.9%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 28.0 3.44e-01 88.4% 65.1%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 24.0 3.00e-01 91.6% 62.1%
1tpmA00 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.51 23.0 2.94e-01 90.5% 72.0%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.50 28.0 3.31e-01 95.8% 80.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3561493 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.67 27.0 4.19e-01 81.1% 100.0%
3665481 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.64 27.0 3.78e-01 97.9% 82.2%
3356611 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.59 28.0 3.45e-01 87.4% 70.9%
4948768 708.1.2.2 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › SelR 0.58 29.0 3.07e-01 91.6% 50.6%
4863926 375.1.1.31 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.56 31.0 4.02e-01 72.6% 96.3%
3647333 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.54 34.0 3.43e-01 88.4% 61.0%
3597992 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.53 31.0 3.89e-01 94.7% 100.0%
3890922 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.53 30.0 3.00e-01 72.6% 49.5%
3833207 5.1.4.319 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_1st 0.52 38.0 2.45e-01 76.8% 60.8%
3512463 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.51 40.0 3.67e-01 82.1% 70.8%
3685569 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.51 39.0 3.67e-01 82.1% 75.7%