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MK967379.1__QDM55624.1__SEA_HOKKEND_38__00038
Bact-VirMK967379.1__QDM55624.1__SEA_HOKKEND_38__00038
Identity
- Accession:
- MK967379 ↗
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Taxonomy
TaxID: 2591128
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-121
D2
high
residues 612-690
Domain cluster:
rep: MT234670.1__QIW88495.1__X__00062__D259-340
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00041.28 best | fn3 | 47.2 | 2.90e-12 | 98.7% | 85.7% |
| PF25788.3 | Ig_Rha78A_N | 23.8 | 6.20e-05 | 93.7% | 33.3% |
D3
high
residues 702-881
D4
medium
residues 215-529_554-568
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08757.18 best | CotH | 125.2 | 6.00e-36 | 87.0% | 78.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o1pD02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 40.0 | 4.56e-01 | 88.2% | 92.3% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.52 | 19.0 | 2.74e-01 | 77.6% | 65.8% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.52 | 19.0 | 3.19e-01 | 75.5% | 95.4% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 19.0 | 3.14e-01 | 73.6% | 96.1% |
| 1tw0A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 22.0 | 3.11e-01 | 100.0% | 81.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4949295 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.79 | 75.0 | 7.05e-01 | 98.8% | 91.5% |
| 1838840 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.78 | 75.0 | 7.23e-01 | 98.5% | 91.3% |
| 4145813 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.75 | 61.0 | 6.42e-01 | 98.2% | 90.8% |
| 3713292 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.68 | 63.0 | 6.08e-01 | 96.7% | 93.8% |
| 4930047 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 41.0 | 4.65e-01 | 93.6% | 91.8% |
| 3222568 | 206.1.1.28 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Haspin_kinase | 0.58 | 43.0 | 4.71e-01 | 94.5% | 92.5% |
| 3726140 | 206.1.1.48 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › FTA2 | 0.55 | 39.0 | 4.41e-01 | 93.0% | 91.8% |
| 3735796 | 206.1.1.48 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › FTA2 | 0.54 | 36.0 | 4.25e-01 | 93.6% | 96.0% |
| 3907133 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 42.0 | 4.50e-01 | 94.8% | 92.6% |
| 3203766 | 206.1.1.48 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › FTA2 | 0.53 | 35.0 | 3.91e-01 | 92.4% | 81.9% |
| 3294272 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 4.36e-01 | 88.2% | 81.4% |
| 3276454 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.53 | 41.0 | 4.31e-01 | 93.9% | 88.1% |
| 3827929 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 44.0 | 4.55e-01 | 90.3% | 92.8% |
| None | — | 0.53 | 40.0 | 4.46e-01 | 93.6% | 98.5% | |
| 3635059 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 43.0 | 4.51e-01 | 91.8% | 92.9% |
| 2968844 | 206.1.1.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C | 0.52 | 45.0 | 4.53e-01 | 97.6% | 90.2% |
| 3597252 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 44.0 | 4.03e-01 | 90.3% | 82.1% |
| 3242222 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 42.0 | 4.26e-01 | 90.3% | 84.5% |
| 3893883 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 42.0 | 4.26e-01 | 94.5% | 86.9% |
| 4031201 | 206.1.1.15 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Fructosamin_kin | 0.51 | 36.0 | 3.96e-01 | 92.1% | 85.0% |
D5
medium
residues 894-925_1008-1117_1137-1200_1237-1256
Domain cluster:
representative
D6
medium
residues 926-1007
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702737 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.86e-01 | 100.0% | 71.0% |
| 3385383 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.50 | 39.0 | 2.70e-01 | 87.8% | 94.5% |
D7
medium
residues 1118-1136_1201-1236_1257-1309
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 38.0 | 3.08e-01 | 79.6% | 67.9% |
D8
medium
residues 1310-1366
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3494946 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.58 | 40.0 | 2.53e-01 | 73.7% | 72.5% |
| 3270212 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.53 | 38.0 | 2.38e-01 | 80.7% | 74.4% |