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MK976036.1__QEA09565.1__X__00019
Bact-VirMK976036.1__QEA09565.1__X__00019
Identity
- Accession:
- MK976036 ↗
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-80
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00132__D29-77_93-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04717.19 best | Phage_base_V | 36.9 | 5.50e-09 | 76.2% | 94.7% |
D2
medium
residues 97-144
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qr8A02 | 6.20.150.10 | Special › Other non-globular › Chondroitinase Ac; Chain A, domain 3 › | 0.66 | 59.0 | 5.11e-01 | 100.0% | 75.3% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 41.0 | 2.92e-01 | 70.8% | 63.2% |
| 4i0wD02 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.60e-01 | 97.9% | 56.2% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 42.0 | 2.61e-01 | 85.4% | 62.3% |
| 1y9lA00 | 2.40.128.230 | Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM | 0.54 | 44.0 | 3.38e-01 | 89.6% | 55.5% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 43.0 | 2.90e-01 | 97.9% | 54.9% |
| 1b12A02 | 2.170.230.10 | Mainly Beta › Beta Complex › Signal Peptidase I; Chain: A, domain 2 › | 0.53 | 32.0 | 2.84e-01 | 85.4% | 35.1% |
| 1w5rA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.51 | 40.0 | 2.89e-01 | 95.8% | 67.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2559748 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.92 | 81.0 | 5.44e-01 | 100.0% | 28.7% |
| 1746334 | 79.1.1.12 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp138_C | 0.82 | 71.0 | 5.83e-01 | 100.0% | 54.4% |
| 4319423 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.79 | 51.0 | 5.35e-01 | 72.9% | 74.4% |
| 3970340 | 2.7.1.4 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › DUF6484 | 0.76 | 57.0 | 4.19e-01 | 91.7% | 31.0% |
| 3981434 | 79.1.1.15 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Apex | 0.67 | 60.0 | 4.70e-01 | 100.0% | 54.0% |
| 3946712 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.67 | 59.0 | 5.02e-01 | 100.0% | 67.5% |
| 4957570 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.66 | 38.0 | 2.72e-01 | 83.3% | 19.3% |
| 4874012 | 79.1.1.7 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage_spike | 0.65 | 58.0 | 4.59e-01 | 100.0% | 56.1% |
| 4413978 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.63 | 57.0 | 3.54e-01 | 100.0% | 20.4% |
| 3970534 | 79.1.1.17 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF2345 | 0.63 | 56.0 | 4.13e-01 | 100.0% | 44.0% |
| 3972332 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.63 | 55.0 | 4.19e-01 | 100.0% | 47.8% |
| None | — | 0.62 | 55.0 | 3.46e-01 | 100.0% | 20.9% | |
| 4374595 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.62 | 55.0 | 4.85e-01 | 100.0% | 75.7% |
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.59 | 36.0 | 2.83e-01 | 87.5% | 25.7% |
| 3781730 | 5.1.11.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller | 0.59 | 45.0 | 2.68e-01 | 85.4% | 73.0% |
| 5063391 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 36.0 | 2.70e-01 | 83.3% | 25.4% |
| 3992656 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 43.0 | 2.84e-01 | 93.8% | 24.3% |
| 3243587 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.52 | 39.0 | 2.41e-01 | 87.5% | 12.7% |
| 3450675 | 2003.1.5.44 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MT-A70 | 0.51 | 36.0 | 2.21e-01 | 79.2% | 32.5% |