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MK977703.1__QDF19555.1__SEA_KUMOTTA_45__00045
Bact-VirMK977703.1__QDF19555.1__SEA_KUMOTTA_45__00045
Identity
- Accession:
- MK977703 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Taxonomy
TaxID: 2588498
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 76-129
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iqcA00 | 1.25.40.490 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 53.0 | 3.72e-01 | 96.3% | 45.7% |
| 2pn5A09 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.60 | 49.0 | 3.19e-01 | 100.0% | 38.1% |
| 3hm6X01 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.55 | 47.0 | 2.85e-01 | 100.0% | 41.9% |
| 1c4zA01 | 3.90.1750.10 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains | 0.54 | 44.0 | 3.28e-01 | 98.1% | 59.4% |
| 1xocA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.54 | 35.0 | 2.36e-01 | 85.2% | 15.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3408042 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 55.0 | 3.32e-01 | 92.6% | 14.1% |
| 4012049 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.60 | 50.0 | 3.86e-01 | 94.4% | 41.6% |
| 3296786 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.60 | 51.0 | 3.90e-01 | 94.4% | 51.7% |
| 3805561 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 50.0 | 3.77e-01 | 92.6% | 49.6% |
| 3330654 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 50.0 | 3.77e-01 | 94.4% | 49.2% |
| 3878750 | 109.4.1.153 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FANCF | 0.58 | 47.0 | 3.41e-01 | 98.1% | 47.0% |
| 3392962 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.58 | 52.0 | 3.48e-01 | 100.0% | 59.5% |
| 3308741 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.58 | 49.0 | 3.74e-01 | 94.4% | 50.4% |
| 3357520 | 310.2.1.28 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 | 0.56 | 47.0 | 4.07e-01 | 94.4% | 67.1% |
| 3346727 | 605.1.1.224 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Myb_DNA-bind_3 | 0.56 | 47.0 | 4.35e-01 | 94.4% | 75.7% |
| 3367703 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.55 | 48.0 | 3.63e-01 | 96.3% | 42.4% |
| 3544661 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 36.0 | 3.61e-01 | 74.1% | 67.3% |
| 3544662 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 35.0 | 3.58e-01 | 70.4% | 67.3% |
| 3581477 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 39.0 | 4.14e-01 | 87.0% | 100.0% |
| 4930547 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.74e-01 | 92.6% | 97.5% |