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MK977714.1__QDF20225.1__SEA_BRAN_43__00043
Bact-VirMK977714.1__QDF20225.1__SEA_BRAN_43__00043
Identity
- Accession:
- MK977714 ↗
- Kingdom:
- phage
Quality
95.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 45.0 | 4.22e-01 | 100.0% | 56.3% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 49.0 | 4.23e-01 | 100.0% | 52.8% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 45.0 | 4.10e-01 | 100.0% | 56.0% |
| 1szhA01 | 1.10.150.360 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.62 | 42.0 | 4.30e-01 | 100.0% | 73.8% |
| 1gu2A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.59 | 45.0 | 3.74e-01 | 82.6% | 76.6% |
| 7oiyA01 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 50.0 | 3.49e-01 | 100.0% | 62.6% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 34.0 | 3.41e-01 | 89.9% | 54.7% |
| 2igpA00 | 1.10.418.30 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Ncd80 subunit | 0.54 | 42.0 | 3.63e-01 | 87.0% | 58.8% |
| 3kezA03 | 1.25.40.900 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 42.0 | 3.56e-01 | 85.5% | 82.9% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.27e-01 | 100.0% | 41.9% |
| 2jlnA00 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.53 | 46.0 | 2.83e-01 | 100.0% | 42.5% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.53 | 30.0 | 2.74e-01 | 71.0% | 38.5% |
| 2gkmA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 46.0 | 3.79e-01 | 100.0% | 63.8% |
| 1t11A02 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.51 | 44.0 | 3.32e-01 | 95.7% | 41.6% |
| 1kgqA01 | 1.10.166.10 | Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain | 0.50 | 40.0 | 4.06e-01 | 89.9% | 85.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3729821 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.78 | 71.0 | 5.39e-01 | 100.0% | 86.5% |
| 3619183 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.68 | 61.0 | 4.71e-01 | 100.0% | 59.3% |
| 4874207 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.66 | 53.0 | 4.80e-01 | 100.0% | 64.8% |
| 3776870 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.66 | 51.0 | 3.07e-01 | 100.0% | 12.8% |
| 4034077 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.63 | 48.0 | 4.03e-01 | 100.0% | 48.7% |
| 3077432 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.62 | 54.0 | 4.43e-01 | 100.0% | 53.7% |
| 5007487 | 164.1.1.33 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › DUF2391 | 0.62 | 43.0 | 3.55e-01 | 72.5% | 41.1% |
| 3400106 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.61 | 55.0 | 4.20e-01 | 100.0% | 43.7% |
| 3477366 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.61 | 52.0 | 4.38e-01 | 100.0% | 55.0% |
| 3472347 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.61 | 49.0 | 2.99e-01 | 89.9% | 14.5% |
| 3743886 | 109.4.1.1318 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › N1221, DUF3402 | 0.61 | 43.0 | 2.56e-01 | 97.1% | 9.6% |
| 1873819 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.60 | 48.0 | 4.46e-01 | 100.0% | 68.6% |
| 3688471 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.60 | 41.0 | 3.75e-01 | 72.5% | 52.6% |
| 4321846 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.60 | 47.0 | 3.92e-01 | 100.0% | 49.2% |
| 3391350 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.59 | 50.0 | 4.13e-01 | 100.0% | 51.5% |
| 5041258 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.56 | 48.0 | 4.05e-01 | 100.0% | 73.6% |
| 3840974 | 150.3.1.2 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Interferon | 0.55 | 42.0 | 3.20e-01 | 79.7% | 52.3% |
| 4012658 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.54 | 42.0 | 2.77e-01 | 87.0% | 63.8% |
| 3857450 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.53 | 46.0 | 3.61e-01 | 100.0% | 43.9% |
| 3886648 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.53 | 47.0 | 3.28e-01 | 100.0% | 31.3% |
| 3214948 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.53 | 46.0 | 3.38e-01 | 100.0% | 43.6% |
| 4212461 | 5054.1.1.74 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan, CaM_bdg_C0 | 0.52 | 46.0 | 3.49e-01 | 100.0% | 41.8% |
| 4022694 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 45.0 | 3.01e-01 | 100.0% | 76.6% |
| 3371913 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 44.0 | 3.04e-01 | 100.0% | 55.6% |
| 3969336 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 45.0 | 4.01e-01 | 100.0% | 72.0% |
| 3786420 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.51 | 42.0 | 3.75e-01 | 95.7% | 73.3% |
| 4125319 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.50 | 42.0 | 3.08e-01 | 100.0% | 33.7% |