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MN013189.1__QDB71426.1__Mic1_57__00057

Bact-Vir

MN013189.1__QDB71426.1__Mic1_57__00057

Identity

Accession:
MN013189 ↗
Kingdom:
phage

Quality

94.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microcystis_phage_Mic1

TaxID: 2587456

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-58
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.81 54.0 4.58e-01 74.1% 42.2%
1q5nA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.77 62.0 5.38e-01 98.1% 58.0%
7kpsB01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.75 62.0 4.30e-01 92.6% 66.5%
1kl7A02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.74 56.0 3.57e-01 87.0% 17.4%
3aj3A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.73 51.0 3.23e-01 83.3% 14.7%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.72 62.0 6.06e-01 98.1% 100.0%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.70 61.0 5.52e-01 94.4% 73.2%
3ermB00 1.10.10.710 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like 0.70 49.0 4.68e-01 77.8% 62.5%
1tafB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.69 47.0 4.29e-01 70.4% 58.6%
3ufeA02 1.20.58.1950 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 53.0 5.35e-01 87.0% 83.0%
4h8aB01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.69 61.0 5.91e-01 100.0% 100.0%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.69 55.0 4.61e-01 90.7% 93.8%
1wojA00 3.90.1740.10 Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily 0.67 49.0 3.30e-01 77.8% 94.3%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 57.0 4.06e-01 98.1% 86.2%
7z67A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 44.0 3.01e-01 70.4% 89.4%
3dddA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 54.0 4.10e-01 92.6% 79.2%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 56.0 4.88e-01 100.0% 72.3%
3ohsX02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.64 46.0 3.09e-01 77.8% 88.1%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.64 43.0 4.14e-01 72.2% 98.5%
1mjtB01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.63 49.0 3.76e-01 90.7% 35.7%
3bosA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 54.0 5.05e-01 98.1% 83.6%
3nufB00 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.61 50.0 4.08e-01 98.1% 49.1%
3dwgA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 46.0 3.19e-01 83.3% 81.2%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.59 42.0 3.69e-01 74.1% 71.8%
1jwjA01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.59 47.0 3.41e-01 90.7% 28.4%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 39.0 3.27e-01 70.4% 62.1%
1rm6B02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.58 40.0 3.27e-01 72.2% 51.4%
3aqlA02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.58 42.0 2.72e-01 75.9% 17.7%
2bhsB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 43.0 3.10e-01 83.3% 84.3%
3b0bB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.57 47.0 3.95e-01 94.4% 77.3%
2r40D00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.57 41.0 2.62e-01 74.1% 75.1%
4zqbB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 48.0 3.72e-01 100.0% 77.4%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 50.0 3.64e-01 100.0% 85.4%
4pg4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 44.0 3.37e-01 98.1% 87.5%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 37.0 2.65e-01 70.4% 32.6%
1ibcB00 3.30.70.1470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like 0.54 46.0 3.99e-01 100.0% 63.6%
1pyoB00 3.30.70.1470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like 0.53 44.0 3.72e-01 100.0% 54.1%
1i51B00 3.30.70.1470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like 0.53 43.0 3.80e-01 100.0% 59.8%
1jdiA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.52 44.0 2.99e-01 96.3% 52.5%
3kevA02 1.10.238.200 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Cullin, PONY binding domain 0.52 43.0 3.69e-01 100.0% 72.6%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 2.84e-01 85.2% 22.5%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.52 39.0 2.67e-01 83.3% 69.5%
2v4jA01 6.10.140.1420 Special › Helix non-globular › Helix Hairpins › 0.50 39.0 3.71e-01 81.5% 79.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942943 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.87 60.0 4.67e-01 74.1% 35.5%
5083348 4953.1.1.2 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C 0.78 64.0 5.46e-01 98.1% 56.5%
3219497 103.4.1.5 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 0.77 62.0 5.67e-01 87.0% 82.9%
4597106 4953.1.1.2 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C 0.75 64.0 5.41e-01 98.1% 58.8%
4953264 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.74 67.0 5.67e-01 100.0% 70.6%
4991464 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 4.31e-01 81.5% 42.5%
3925064 148.1.1.7 ↗ alpha arrays › Histone-like › Histone-related › Histone › TAF 0.71 50.0 4.42e-01 72.2% 77.3%
3201627 2003.4.1.2 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › THR4_C 0.70 55.0 3.45e-01 87.0% 17.2%
1346828 103.5.1.3 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › IPMS_D2 0.70 60.0 5.01e-01 100.0% 56.6%
3297516 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.70 60.0 5.19e-01 100.0% 61.2%
4479434 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.70 61.0 5.43e-01 96.3% 72.0%
4159135 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.70 61.0 5.30e-01 100.0% 65.0%
3386111 6130.1.1.0 ↗ alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain 0.70 61.0 5.61e-01 100.0% 81.4%
3491303 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 55.0 4.50e-01 87.0% 74.7%
5051792 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 59.0 4.85e-01 100.0% 62.0%
3666433 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 50.0 3.84e-01 79.6% 80.8%
3959274 103.5.1.3 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › IPMS_D2 0.66 46.0 3.57e-01 81.5% 34.8%
4326169 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.65 57.0 4.88e-01 100.0% 70.0%
3958041 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 41.0 3.97e-01 72.2% 53.8%
4247735 2008.1.1.59 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.65 52.0 2.89e-01 88.9% 8.4%
3218555 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.64 48.0 3.54e-01 87.0% 30.0%
3306315 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.64 44.0 3.62e-01 72.2% 45.3%
3957316 101.1.1.266 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.64 41.0 3.92e-01 72.2% 53.8%
3197897 616.1.1.0 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.63 45.0 4.34e-01 74.1% 76.7%
3524719 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 45.0 4.08e-01 75.9% 77.3%
2740651 5054.1.1.59 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.63 51.0 3.33e-01 88.9% 24.1%
3310266 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.62 51.0 4.82e-01 98.1% 88.6%
3461263 386.1.1.3 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-TRAF 0.61 51.0 3.85e-01 96.3% 44.3%
4296126 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 52.0 3.00e-01 96.3% 71.1%
3622361 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 48.0 4.17e-01 96.3% 86.3%
3365101 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 41.0 3.20e-01 70.4% 33.0%
5083383 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 40.0 3.90e-01 74.1% 63.3%
3689582 101.1.1.337 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GATA_AreA 0.59 44.0 3.92e-01 79.6% 90.7%
4484002 4966.1.1.0 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase 0.58 48.0 4.24e-01 92.6% 66.3%
3703430 4193.1.1.0 ↗ alpha arrays › RUN domain › RUN domain › RUN domain 0.57 49.0 3.49e-01 100.0% 32.6%
4962121 2498.5.1.0 ↗ mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like 0.57 49.0 4.26e-01 98.1% 95.3%
4619943 376.1.3.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.57 40.0 2.97e-01 74.1% 82.2%
3909952 129.1.1.0 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.57 43.0 2.79e-01 87.0% 19.3%
None — 0.52 35.0 2.18e-01 70.4% 19.4%
D2 medium residues 59-109
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dk4A00 4.10.280.110 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Pre-mRNA processing factor 4 domain 0.67 49.0 4.35e-01 100.0% 53.9%
4z7eA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 54.0 3.87e-01 96.1% 34.9%
3da8B00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.64 46.0 3.12e-01 78.4% 65.9%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 42.0 2.62e-01 70.6% 26.4%
2glzA00 3.30.1330.130 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.63 44.0 3.11e-01 74.5% 81.2%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.62 46.0 2.75e-01 80.4% 18.5%
3fbsB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 48.0 3.33e-01 88.2% 38.3%
3o7bA00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.61 44.0 2.89e-01 76.5% 63.0%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 45.0 4.06e-01 84.3% 92.0%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 42.0 2.76e-01 74.5% 41.8%
3c7aA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.59 41.0 2.81e-01 72.5% 86.4%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.08e-01 80.4% 39.7%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 3.71e-01 82.4% 93.1%
3agrA02 3.30.420.540 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.58 45.0 2.75e-01 88.2% 84.9%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.58 44.0 3.14e-01 88.2% 66.7%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.28e-01 86.3% 48.4%
2i71A01 3.40.50.10640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like 0.56 47.0 3.14e-01 98.0% 54.3%
2w82A03 1.10.10.1190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Antirestriction protein ArdA, domain 3 0.55 46.0 4.41e-01 100.0% 95.2%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.45e-01 80.4% 65.6%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.40e-01 84.3% 74.7%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.70e-01 88.2% 92.6%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.91e-01 84.3% 91.7%
2a02A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.53 41.0 3.75e-01 90.2% 80.0%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.33e-01 86.3% 71.3%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.93e-01 90.2% 87.5%
2w4sA00 1.10.10.1440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain 0.53 42.0 3.64e-01 92.2% 76.7%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.69e-01 100.0% 56.3%
4kdyB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 37.0 3.23e-01 74.5% 82.5%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.52 43.0 3.34e-01 92.2% 41.7%
3f0zA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.52 42.0 3.30e-01 90.2% 38.8%
2byvE03 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 40.0 2.75e-01 84.3% 65.4%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.56e-01 94.1% 70.0%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.52 41.0 2.98e-01 90.2% 55.8%
1xdsB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.29e-01 84.3% 57.6%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.81e-01 92.2% 92.3%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.43e-01 86.3% 80.8%
2v9vA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 36.0 3.43e-01 96.1% 60.9%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.74e-01 98.0% 66.7%
3kfwX01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.64e-01 92.2% 86.7%
3dxqB02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.50 39.0 2.67e-01 88.2% 57.8%
4p16A02 1.10.8.1190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain 0.50 41.0 3.21e-01 100.0% 47.2%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.34e-01 100.0% 50.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
139338 2002.1.1.16 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.62 46.0 2.76e-01 80.4% 18.0%
3358560 101.1.2.509 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25879 0.61 52.0 4.67e-01 100.0% 70.7%
3291655 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.60 45.0 3.68e-01 80.4% 66.3%
3859783 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.60 42.0 2.62e-01 74.5% 35.2%
3925825 102.1.2.1 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD 0.59 48.0 3.16e-01 90.2% 21.3%
3816885 320.4.1.0 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain 0.57 46.0 3.63e-01 92.2% 60.0%
4986948 205.1.1.17 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_11 0.57 49.0 3.33e-01 96.1% 96.8%
3401200 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 3.86e-01 92.2% 91.6%
5045662 102.1.2.1 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD 0.57 46.0 3.06e-01 90.2% 21.8%
3922802 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.56 41.0 3.19e-01 80.4% 47.5%
3508184 101.1.2.103 ↗ alpha arrays › HTH › HTH › winged helix domain › SelB-wing_2 0.56 42.0 3.73e-01 96.1% 56.0%
4944834 3625.1.1.0 ↗ alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain 0.56 42.0 3.40e-01 84.3% 58.2%
3613338 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 42.0 2.24e-01 80.4% 11.5%
4441063 102.1.2.1 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD 0.55 45.0 3.01e-01 90.2% 22.9%
4005246 101.1.2.60 ↗ alpha arrays › HTH › HTH › winged helix domain › HA2_N 0.55 45.0 4.22e-01 94.1% 86.2%
3588764 101.1.2.16 ↗ alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.55 44.0 3.41e-01 90.2% 77.5%
3391140 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.54 47.0 3.79e-01 100.0% 50.0%
3726058 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 45.0 2.79e-01 100.0% 32.7%
5022256 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 3.73e-01 94.1% 71.1%
4929625 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 3.37e-01 92.2% 48.3%
3583002 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.53 39.0 3.65e-01 88.2% 61.4%
5040315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 3.64e-01 92.2% 76.7%
4997864 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 3.11e-01 100.0% 37.6%
1688723 109.21.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nup96 0.53 38.0 2.45e-01 78.4% 15.2%
4964369 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.56e-01 100.0% 50.5%
3740394 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 3.31e-01 92.2% 52.9%
4251290 101.1.2.573 ↗ alpha arrays › HTH › HTH › winged helix domain › NPHP3_hel 0.53 43.0 3.51e-01 92.2% 73.0%
3381711 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.53 42.0 3.39e-01 90.2% 45.7%
5009952 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 3.66e-01 96.1% 66.7%
3930028 109.4.1.235 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.53 38.0 2.25e-01 80.4% 15.9%
4119938 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.52 45.0 2.84e-01 100.0% 64.3%
5039517 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.94e-01 94.1% 87.1%
3287188 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 42.0 3.92e-01 94.1% 69.2%
5035389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.49e-01 88.2% 75.3%
3905735 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.52 39.0 3.43e-01 88.2% 56.5%
5070233 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.46e-01 94.1% 53.3%
5002881 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 3.51e-01 100.0% 48.0%
4950831 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 3.72e-01 92.2% 75.7%
3618188 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.50 41.0 3.26e-01 94.1% 60.9%
3780237 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.50 40.0 2.74e-01 88.2% 72.4%