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MN018232.1__QDH50650.1__X__00184
Bact-VirMN018232.1__QDH50650.1__X__00184
Identity
- Accession:
- MN018232 ↗
- Kingdom:
- phage
Quality
95.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_S-B43
TaxID: 2484638
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-76
Domain cluster:
rep: BML_08182015_6_5m_scaffold_7_prodigal-single.1__X__X__00200__D2-69
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hfqA00 | 3.10.510.10 | Alpha Beta › Roll › NE1680-like fold › NE1680-like | 0.67 | 60.0 | 5.78e-01 | 100.0% | 95.3% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 55.0 | 5.50e-01 | 96.0% | 90.8% |
| 1oruA00 | 2.40.33.20 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.57 | 44.0 | 3.41e-01 | 85.3% | 55.8% |
| 2jovA01 | 3.10.530.10 | Alpha Beta › Roll › CPE0013-like fold › CPE0013-like | 0.57 | 39.0 | 3.99e-01 | 98.7% | 74.6% |
| 3ihmA02 | 3.30.9.40 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.56 | 41.0 | 3.49e-01 | 84.0% | 73.6% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.55 | 40.0 | 3.63e-01 | 77.3% | 87.9% |
| 2ok5A02 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 45.0 | 3.32e-01 | 93.3% | 94.5% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 40.0 | 3.69e-01 | 90.7% | 60.4% |
| 3mmlF01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 37.0 | 3.73e-01 | 86.7% | 69.6% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 36.0 | 3.05e-01 | 70.7% | 76.9% |
| 1lnsA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 3.01e-01 | 98.7% | 42.4% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.52 | 41.0 | 3.85e-01 | 92.0% | 69.0% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 38.0 | 2.49e-01 | 81.3% | 100.0% |
| 6nffA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 2.95e-01 | 100.0% | 30.7% |
| 1kblA06 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 40.0 | 3.71e-01 | 90.7% | 84.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3938541 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.68 | 49.0 | 5.26e-01 | 78.7% | 95.0% |
| 5469 | 4943.1.1.2 ↗ | a+b two layers › YcgL/NE1680-like › YcgL/NE1680-like › YcgL/NE1680-like › DUF2024 | 0.67 | 60.0 | 5.78e-01 | 100.0% | 95.3% |
| 3823795 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 42.0 | 2.87e-01 | 70.7% | 39.2% |
| 5068178 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.58 | 45.0 | 4.22e-01 | 85.3% | 68.4% |
| 3398909 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.58 | 42.0 | 2.74e-01 | 78.7% | 42.9% |
| 3927238 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 41.0 | 2.66e-01 | 77.3% | 66.9% |
| 3170399 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.55 | 46.0 | 3.53e-01 | 96.0% | 86.8% |
| 4991219 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.55 | 42.0 | 3.06e-01 | 84.0% | 88.4% |
| 3182134 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 39.0 | 4.18e-01 | 78.7% | 89.2% |
| 3788543 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.54 | 38.0 | 2.66e-01 | 77.3% | 90.5% |
| 3846015 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 44.0 | 3.09e-01 | 96.0% | 81.9% |
| 3178425 | 221.1.1.179 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ams2-SPT21_N | 0.52 | 42.0 | 3.50e-01 | 90.7% | 88.4% |
| 3469605 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.50 | 37.0 | 3.15e-01 | 80.0% | 76.9% |