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MN043729.1__QDP42840.1__Goe8_c00560__00056
Bact-VirMN043729.1__QDP42840.1__Goe8_c00560__00056
Identity
- Accession:
- MN043729 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Goettingenvirus›
Bacillus_phage_vB_BmeM-Goe8
TaxID: 2593638
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.70 | 56.0 | 4.84e-01 | 88.1% | 70.2% |
| 3o58V00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.67 | 49.0 | 4.92e-01 | 93.2% | 79.7% |
| 2rowA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.65 | 50.0 | 4.71e-01 | 86.4% | 69.0% |
| 2xb1A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 49.0 | 4.17e-01 | 83.1% | 64.6% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.62 | 51.0 | 5.09e-01 | 93.2% | 87.1% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 50.0 | 4.85e-01 | 88.1% | 89.4% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 41.0 | 3.98e-01 | 71.2% | 79.1% |
| 1wewA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 44.0 | 4.08e-01 | 79.7% | 79.5% |
| 1vq8U00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.60 | 46.0 | 4.78e-01 | 93.2% | 96.2% |
| 2gatA00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.59 | 41.0 | 3.97e-01 | 91.5% | 65.2% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 42.0 | 3.61e-01 | 83.1% | 46.9% |
| 1rmdA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 42.0 | 3.76e-01 | 86.4% | 53.5% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.57 | 47.0 | 3.03e-01 | 96.6% | 67.6% |
| 2m6mA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 43.0 | 3.92e-01 | 84.7% | 72.3% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 39.0 | 3.79e-01 | 89.8% | 63.4% |
| 5d0iB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 38.0 | 3.97e-01 | 83.1% | 84.3% |
| 2c2vV00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 37.0 | 3.63e-01 | 86.4% | 64.3% |
| 3ng2B00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 40.0 | 3.87e-01 | 86.4% | 76.1% |
| 1g25A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 40.0 | 3.92e-01 | 88.1% | 83.1% |
| 1z6uA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 39.0 | 3.24e-01 | 88.1% | 45.2% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 36.0 | 3.62e-01 | 88.1% | 79.7% |
| 3g9kF01 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.51 | 40.0 | 3.11e-01 | 96.6% | 100.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8214 | 377.4.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › YlxR | 0.70 | 56.0 | 4.83e-01 | 88.1% | 70.2% |
| 4669982 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 53.0 | 5.62e-01 | 100.0% | 100.0% |
| 3590662 | 377.4.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › YlxR | 0.67 | 54.0 | 4.69e-01 | 88.1% | 71.1% |
| 5049855 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 51.0 | 5.11e-01 | 88.1% | 81.7% |
| 4882574 | 375.1.1.35 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2753_ZBP | 0.66 | 53.0 | 5.36e-01 | 89.8% | 91.4% |
| 3726704 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 45.0 | 4.77e-01 | 81.4% | 83.0% |
| 3253247 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 52.0 | 5.06e-01 | 88.1% | 96.9% |
| 4996272 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 49.0 | 4.94e-01 | 86.4% | 83.3% |
| 3817332 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 49.0 | 4.78e-01 | 88.1% | 76.9% |
| 3667602 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 52.0 | 4.90e-01 | 88.1% | 78.6% |
| 3331318 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.64 | 51.0 | 4.96e-01 | 88.1% | 80.0% |
| 4932487 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.63 | 48.0 | 4.60e-01 | 88.1% | 71.4% |
| 3375836 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.63 | 48.0 | 4.08e-01 | 88.1% | 50.0% |
| 3596997 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.63 | 42.0 | 3.13e-01 | 71.2% | 58.7% |
| 3320867 | 376.1.1.105 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF25998 | 0.63 | 48.0 | 4.22e-01 | 84.7% | 61.1% |
| 3221156 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 46.0 | 4.79e-01 | 89.8% | 87.3% |
| 3659676 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 48.0 | 4.77e-01 | 83.1% | 95.0% |
| 3743231 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 44.0 | 4.17e-01 | 86.4% | 62.7% |
| 3306931 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 48.0 | 3.86e-01 | 88.1% | 43.3% |
| 3725952 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 45.0 | 3.95e-01 | 88.1% | 51.6% |
| 3365516 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.60 | 47.0 | 4.21e-01 | 88.1% | 62.4% |
| 3250122 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 46.0 | 3.96e-01 | 88.1% | 54.0% |
| 3788201 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 43.0 | 4.54e-01 | 84.7% | 96.0% |
| 3686834 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.59 | 45.0 | 4.24e-01 | 86.4% | 90.7% |
| 3820307 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.58 | 40.0 | 4.22e-01 | 86.4% | 88.0% |
| 3355343 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 40.0 | 4.19e-01 | 86.4% | 88.0% |
| 4025246 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.58 | 45.0 | 4.14e-01 | 88.1% | 72.5% |
| 3621780 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.57 | 43.0 | 3.99e-01 | 84.7% | 66.3% |
| 3271906 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.57 | 38.0 | 3.86e-01 | 71.2% | 69.5% |
| 3638059 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.57 | 44.0 | 4.04e-01 | 88.1% | 71.2% |
| 3844071 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.56 | 40.0 | 3.80e-01 | 86.4% | 62.7% |
| 3813302 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 40.0 | 3.82e-01 | 83.1% | 64.0% |
| None | — | 0.56 | 41.0 | 3.98e-01 | 100.0% | 71.4% | |
| 3737606 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 38.0 | 4.06e-01 | 78.0% | 95.6% |
| 3369091 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 42.0 | 3.53e-01 | 88.1% | 74.8% |
| 3817834 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.55 | 42.0 | 3.96e-01 | 88.1% | 70.7% |
| 3311213 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 41.0 | 3.92e-01 | 86.4% | 74.7% |
| 3307794 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 41.0 | 4.03e-01 | 88.1% | 78.5% |
| None | — | 0.55 | 40.0 | 4.04e-01 | 83.1% | 93.3% | |
| 3400502 | 376.1.2.12 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_2 | 0.55 | 41.0 | 4.06e-01 | 88.1% | 80.0% |
| None | — | 0.54 | 39.0 | 3.98e-01 | 83.1% | 80.0% | |
| 3825395 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 39.0 | 3.81e-01 | 88.1% | 70.0% |
| 3410722 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 40.0 | 4.07e-01 | 86.4% | 83.3% |
| 3239632 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.54 | 40.0 | 3.65e-01 | 86.4% | 57.6% |
| 3922970 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.54 | 41.0 | 3.71e-01 | 88.1% | 84.4% |
| 4014325 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 39.0 | 3.81e-01 | 88.1% | 70.0% |
| 3661809 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 41.0 | 4.02e-01 | 88.1% | 96.9% |
| 3637145 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 38.0 | 3.47e-01 | 88.1% | 52.2% |
| 3993815 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.53 | 37.0 | 3.24e-01 | 88.1% | 45.0% |
| 3874218 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 38.0 | 3.67e-01 | 83.1% | 68.6% |
| 3409733 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.52 | 39.0 | 3.96e-01 | 88.1% | 85.0% |
| 3398581 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.52 | 39.0 | 3.55e-01 | 86.4% | 56.7% |
| 3805506 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.52 | 37.0 | 3.71e-01 | 86.4% | 76.7% |
| 3698554 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.52 | 39.0 | 3.67e-01 | 88.1% | 77.5% |
| 3309464 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 35.0 | 2.95e-01 | 94.9% | 36.0% |
| 3267109 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.51 | 39.0 | 3.82e-01 | 88.1% | 83.1% |
| 3480518 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 38.0 | 3.67e-01 | 86.4% | 72.9% |
| 3834122 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 37.0 | 3.48e-01 | 88.1% | 62.5% |
| 3219112 | 192.8.1.443 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-RING_UBOX | 0.50 | 38.0 | 2.74e-01 | 88.1% | 31.4% |
| 365672 | 210.1.6.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Gamma-glutamyltranspeptidase-like › G_glu_transpept | 0.50 | 40.0 | 3.07e-01 | 96.6% | 98.2% |