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MN043729.1__QDP42843.1__Goe8_c00700__00059

Bact-Vir

MN043729.1__QDP42843.1__Goe8_c00700__00059

Identity

Accession:
MN043729 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Goettingenvirus› Bacillus_phage_vB_BmeM-Goe8

TaxID: 2593638

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-105
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 36.0 4.15e-01 73.5% 88.2%
3bb7A01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.56 42.0 3.56e-01 79.4% 49.4%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 34.0 3.86e-01 74.5% 78.8%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.56 38.0 4.25e-01 83.3% 93.5%
3rlfF03 2.40.430.10 Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP 0.55 39.0 4.15e-01 73.5% 92.0%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 40.0 2.84e-01 78.4% 65.5%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.70e-01 81.4% 72.0%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 39.0 2.82e-01 78.4% 59.9%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 36.0 3.46e-01 72.5% 80.6%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 39.0 2.78e-01 79.4% 59.3%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 38.0 2.77e-01 78.4% 68.3%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.51 35.0 3.44e-01 71.6% 65.1%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 38.0 2.75e-01 79.4% 60.4%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 40.0 5.19e-01 88.2% 100.0%
3801134 3257.1.1.0 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.56 40.0 3.35e-01 74.5% 98.9%
3926623 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.56 38.0 4.32e-01 79.4% 97.3%
3416385 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.55 39.0 3.19e-01 73.5% 94.4%
3514906 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 41.0 3.39e-01 80.4% 56.8%
3483268 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.52 32.0 3.66e-01 70.6% 84.0%
3940305 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 39.0 3.06e-01 79.4% 87.7%
1851179 4184.1.1.1 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.52 33.0 3.83e-01 74.5% 94.3%
3592541 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 4.19e-01 83.3% 100.0%
3247178 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.51 36.0 3.93e-01 76.5% 93.8%