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MN043729.1__QDP42941.1__Goe8_c01680__00157
Bact-VirMN043729.1__QDP42941.1__Goe8_c01680__00157
Identity
- Accession:
- MN043729 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Goettingenvirus›
Bacillus_phage_vB_BmeM-Goe8
TaxID: 2593638
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-139
Domain cluster:
rep: ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00305__D55-230
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10592.15 best | AIPR | 51.2 | 2.10e-13 | 75.7% | 36.8% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nvpD02 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.68 | 23.0 | 4.03e-01 | 87.5% | 93.5% |
| 1nh2D02 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.66 | 24.0 | 3.98e-01 | 88.2% | 93.8% |
| 1afiA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 28.0 | 3.74e-01 | 86.8% | 86.1% |
| 2cpqA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 27.0 | 3.83e-01 | 87.5% | 95.3% |
| 1sjqA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 29.0 | 3.59e-01 | 86.8% | 77.3% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 28.0 | 3.37e-01 | 87.5% | 78.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016948 | 876.1.1.7 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › AIPR | 0.90 | 85.0 | 7.99e-01 | 98.5% | 98.1% |
| 3976508 | 876.1.1.7 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › AIPR | 0.88 | 84.0 | 7.99e-01 | 100.0% | 98.1% |
| 3941459 | 876.1.1.7 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › AIPR | 0.86 | 81.0 | 7.74e-01 | 99.3% | 96.8% |
| 5083282 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.75 | 54.0 | 6.17e-01 | 89.0% | 100.0% |
| 3283779 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.74 | 61.0 | 6.18e-01 | 87.5% | 100.0% |
| 5031072 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.72 | 62.0 | 6.07e-01 | 91.9% | 100.0% |
| 3950538 | 304.3.1.9 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA_2 | 0.60 | 28.0 | 3.72e-01 | 87.5% | 80.0% |
| 3309238 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.59 | 28.0 | 3.53e-01 | 86.8% | 72.9% |
| 3614391 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 30.0 | 3.48e-01 | 89.7% | 79.0% |
| 3225575 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 30.0 | 3.80e-01 | 85.3% | 98.8% |
D2
high
residues 146-341
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ezcB00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.55 | 41.0 | 3.42e-01 | 100.0% | 43.4% |
| 2pv4A00 | 1.10.3440.10 | Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like | 0.54 | 38.0 | 4.28e-01 | 76.5% | 95.9% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.52 | 32.0 | 3.68e-01 | 82.7% | 80.4% |
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.52 | 40.0 | 3.83e-01 | 78.6% | 87.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018461 | 1076.1.1.4 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease | 0.52 | 39.0 | 3.71e-01 | 76.0% | 94.3% |
| 3948124 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.51 | 39.0 | 3.01e-01 | 94.4% | 35.6% |