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MN045231.1__QEG08108.1__CPT_Paul_012__00012
Bact-VirMN045231.1__QEG08108.1__CPT_Paul_012__00012
Identity
- Accession:
- MN045231 ↗
- Kingdom:
- phage
Quality
68.5
mean pLDDT
Taxonomy
TaxID: 2589659
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-124
D2
high
residues 247-302
Domain cluster:
rep: OQ291035.1__WCZ57928.1__K38_127__00127__D244-296
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.72 | 57.0 | 4.82e-01 | 89.3% | 52.6% |
| 1v6zA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.69 | 54.0 | 5.22e-01 | 89.3% | 96.9% |
| 2azpA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.69 | 52.0 | 3.85e-01 | 85.7% | 39.1% |
| 1v5vA01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.69 | 50.0 | 3.59e-01 | 78.6% | 26.8% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.67 | 46.0 | 4.88e-01 | 75.0% | 87.0% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.67 | 57.0 | 4.77e-01 | 98.2% | 59.6% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.67 | 57.0 | 4.24e-01 | 98.2% | 86.6% |
| 2jo6A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.66 | 48.0 | 3.89e-01 | 78.6% | 40.0% |
| 2h3gX02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 48.0 | 3.54e-01 | 80.4% | 28.3% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.65 | 43.0 | 4.77e-01 | 82.1% | 100.0% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 52.0 | 3.74e-01 | 94.6% | 72.0% |
| 7szeB01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.63 | 44.0 | 3.63e-01 | 78.6% | 39.3% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 46.0 | 4.32e-01 | 78.6% | 83.8% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 54.0 | 3.14e-01 | 100.0% | 10.5% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 48.0 | 2.87e-01 | 82.1% | 30.6% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 45.0 | 3.68e-01 | 82.1% | 48.3% |
| 3ejxA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 49.0 | 3.82e-01 | 100.0% | 79.6% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.60 | 41.0 | 3.19e-01 | 75.0% | 29.6% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.60 | 43.0 | 3.59e-01 | 80.4% | 42.2% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 44.0 | 3.64e-01 | 82.1% | 45.4% |
| 3lh4A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 49.0 | 3.93e-01 | 94.6% | 93.0% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.59 | 43.0 | 4.46e-01 | 82.1% | 100.0% |
| 2b1xA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 42.0 | 3.33e-01 | 78.6% | 38.1% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 3.41e-01 | 78.6% | 42.9% |
| 3frnA03 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 42.0 | 4.42e-01 | 78.6% | 94.1% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 48.0 | 3.08e-01 | 98.2% | 76.9% |
| 7c5wA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 3.27e-01 | 83.9% | 99.3% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 39.0 | 3.70e-01 | 78.6% | 59.1% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 45.0 | 2.80e-01 | 85.7% | 25.2% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 43.0 | 3.61e-01 | 82.1% | 47.9% |
| 1ujcA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 45.0 | 3.42e-01 | 94.6% | 70.5% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 3.01e-01 | 85.7% | 30.3% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 2.86e-01 | 91.1% | 39.5% |
| 3v7bA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 38.0 | 2.97e-01 | 78.6% | 40.1% |
| 3d4eA02 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 40.0 | 3.68e-01 | 83.9% | 98.7% |
| 6tnyB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 44.0 | 3.59e-01 | 94.6% | 80.4% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 46.0 | 2.88e-01 | 100.0% | 70.7% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 41.0 | 2.83e-01 | 96.4% | 78.3% |
| 1zswA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 45.0 | 3.20e-01 | 100.0% | 65.7% |
| 2xdoD00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.55e-01 | 91.1% | 78.3% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 36.0 | 2.73e-01 | 75.0% | 36.1% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 44.0 | 3.18e-01 | 100.0% | 55.2% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 40.0 | 2.86e-01 | 96.4% | 77.5% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.32e-01 | 94.6% | 60.6% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.51 | 40.0 | 2.88e-01 | 98.2% | 76.4% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 44.0 | 3.02e-01 | 100.0% | 53.5% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.51 | 39.0 | 3.65e-01 | 83.9% | 98.6% |
| 1a57A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.46e-01 | 100.0% | 71.6% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 36.0 | 3.17e-01 | 80.4% | 56.4% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.05e-01 | 89.3% | 41.4% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.50 | 38.0 | 3.07e-01 | 82.1% | 43.1% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.89 | 65.0 | 7.28e-01 | 82.1% | 100.0% |
| 3623217 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.84 | 67.0 | 7.02e-01 | 91.1% | 96.0% |
| 4030628 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.82 | 60.0 | 3.46e-01 | 85.7% | 8.6% |
| 3498702 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.78 | 58.0 | 6.28e-01 | 80.4% | 100.0% |
| 3886839 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.74 | 49.0 | 5.52e-01 | 71.4% | 95.0% |
| 3883146 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.73 | 49.0 | 5.33e-01 | 76.8% | 86.7% |
| 3958547 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 59.0 | 5.68e-01 | 89.3% | 93.8% |
| 4932660 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.73 | 63.0 | 4.33e-01 | 100.0% | 91.2% |
| 3326752 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.71 | 60.0 | 3.86e-01 | 98.2% | 56.0% |
| 3539250 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.71 | 61.0 | 5.02e-01 | 100.0% | 61.9% |
| 3271417 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.69 | 58.0 | 3.85e-01 | 98.2% | 63.2% |
| 4944404 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 48.0 | 3.70e-01 | 78.6% | 31.5% |
| 4029045 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.69 | 59.0 | 3.76e-01 | 98.2% | 68.9% |
| 3716797 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.69 | 58.0 | 3.77e-01 | 98.2% | 66.3% |
| 3206403 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 58.0 | 3.82e-01 | 100.0% | 44.9% |
| 4487967 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.69 | 47.0 | 3.90e-01 | 78.6% | 40.0% |
| 3179431 | 5.1.4.362 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_VPS8 | 0.67 | 53.0 | 3.32e-01 | 85.7% | 24.7% |
| 4160795 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.67 | 52.0 | 3.98e-01 | 91.1% | 45.5% |
| 29093 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.66 | 43.0 | 4.75e-01 | 71.4% | 92.5% |
| 1150523 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.66 | 44.0 | 4.01e-01 | 78.6% | 49.4% |
| 3784883 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 54.0 | 3.31e-01 | 89.3% | 20.9% |
| 1273610 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.65 | 54.0 | 4.04e-01 | 94.6% | 70.1% |
| 2856288 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.65 | 44.0 | 4.74e-01 | 78.6% | 97.6% |
| 3937472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 55.0 | 4.54e-01 | 100.0% | 52.4% |
| 4280828 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 52.0 | 5.12e-01 | 91.1% | 98.3% |
| 4588602 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.64 | 49.0 | 5.04e-01 | 85.7% | 100.0% |
| 3608325 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.64 | 51.0 | 3.06e-01 | 89.3% | 26.0% |
| 3954395 | 3097.1.1.0 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y | 0.64 | 52.0 | 5.25e-01 | 94.6% | 100.0% |
| 3282814 | 3097.1.1.0 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y | 0.64 | 53.0 | 4.81e-01 | 98.2% | 78.8% |
| 5051613 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 44.0 | 3.58e-01 | 78.6% | 35.6% |
| 2719643 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.64 | 44.0 | 3.92e-01 | 76.8% | 50.0% |
| 3968312 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.63 | 45.0 | 3.69e-01 | 76.8% | 41.7% |
| 3961965 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.63 | 54.0 | 5.19e-01 | 100.0% | 87.7% |
| 1553937 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.63 | 42.0 | 3.97e-01 | 92.9% | 57.6% |
| 4930189 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 50.0 | 4.95e-01 | 92.9% | 96.7% |
| 4554426 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.63 | 49.0 | 5.04e-01 | 92.9% | 100.0% |
| 4630692 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.63 | 47.0 | 3.50e-01 | 83.9% | 40.6% |
| 5046979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 44.0 | 3.66e-01 | 78.6% | 39.1% |
| 3410503 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 47.0 | 3.51e-01 | 83.9% | 34.6% |
| 3282813 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.62 | 43.0 | 3.92e-01 | 76.8% | 52.5% |
| 5019949 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.62 | 41.0 | 3.56e-01 | 87.5% | 41.1% |
| 1009 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.61 | 42.0 | 3.69e-01 | 76.8% | 46.5% |
| 3478725 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 48.0 | 2.99e-01 | 85.7% | 34.5% |
| None | — | 0.61 | 54.0 | 3.21e-01 | 98.2% | 69.4% | |
| 3736971 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.60 | 47.0 | 2.85e-01 | 85.7% | 25.2% |
| 5051542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 48.0 | 3.38e-01 | 89.3% | 76.3% |
| 3961969 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.60 | 47.0 | 4.68e-01 | 94.6% | 95.0% |
| 3382274 | 5.1.4.369 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N | 0.60 | 53.0 | 2.90e-01 | 98.2% | 32.2% |
| 3289024 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.59 | 49.0 | 4.29e-01 | 100.0% | 60.0% |
| 3951220 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.58 | 49.0 | 3.08e-01 | 98.2% | 58.6% |
| 4989913 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 45.0 | 2.98e-01 | 89.3% | 24.5% |
| 4019953 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.58 | 48.0 | 2.97e-01 | 98.2% | 96.4% |
| 3820829 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.58 | 50.0 | 3.19e-01 | 100.0% | 72.1% |
| 4028006 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.58 | 51.0 | 3.14e-01 | 100.0% | 31.9% |
| 3740081 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.57 | 51.0 | 4.07e-01 | 100.0% | 94.5% |
| 5013363 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.57 | 47.0 | 3.76e-01 | 100.0% | 98.5% |
| 4505047 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.57 | 43.0 | 3.72e-01 | 87.5% | 83.0% |
| 4291202 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.56 | 41.0 | 2.58e-01 | 83.9% | 19.5% |
| 4946341 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.56 | 41.0 | 2.77e-01 | 82.1% | 33.5% |
| 4031135 | 6043.1.1.3 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N | 0.55 | 40.0 | 3.54e-01 | 78.6% | 64.7% |
| 5039683 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 2.85e-01 | 100.0% | 85.8% |
| 4964362 | 6030.1.1.1 ↗ | a+b two layers › Middle domain of ribosomal protein S2-related protein › Middle domain of ribosomal protein S2-related protein › Middle domain of ribosomal protein S2-related protein › DR2241 | 0.55 | 43.0 | 3.58e-01 | 96.4% | 84.2% |
| 4969778 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.54 | 41.0 | 2.78e-01 | 91.1% | 89.6% |
| 4474202 | 809.1.1.7 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF6392 | 0.53 | 38.0 | 3.48e-01 | 76.8% | 69.2% |
| 3778939 | 59.1.1.15 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › ELL | 0.53 | 37.0 | 3.20e-01 | 75.0% | 84.2% |
| 3291166 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 41.0 | 3.43e-01 | 87.5% | 54.3% |
| 3764706 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.52 | 42.0 | 2.90e-01 | 100.0% | 69.6% |
| 3285166 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 40.0 | 3.11e-01 | 89.3% | 49.3% |
| 3970659 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 38.0 | 3.77e-01 | 82.1% | 91.7% |
| 1140832 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.50 | 39.0 | 3.91e-01 | 89.3% | 98.3% |
| 3684031 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.50 | 37.0 | 2.58e-01 | 89.3% | 25.3% |
| 3726185 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.50 | 37.0 | 2.87e-01 | 85.7% | 47.3% |
D3
high
residues 543-607
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 61.0 | 3.84e-01 | 100.0% | 20.2% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.66 | 53.0 | 3.67e-01 | 89.2% | 69.9% |
| 4aweA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 49.0 | 3.06e-01 | 90.8% | 28.3% |
| 3fdxA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 44.0 | 3.67e-01 | 86.2% | 99.2% |
| 5vogA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 46.0 | 3.49e-01 | 95.4% | 35.2% |
| 6ejiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 44.0 | 3.29e-01 | 89.2% | 71.4% |
| 3f2bA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 43.0 | 3.02e-01 | 87.7% | 35.1% |
| 1ju2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 43.0 | 2.78e-01 | 87.7% | 43.4% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 47.0 | 3.61e-01 | 100.0% | 47.1% |
| 2rbcA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 40.0 | 2.70e-01 | 92.3% | 61.4% |
| 1xf1A02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.50 | 41.0 | 3.35e-01 | 100.0% | 60.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1954234 | 207.2.1.31 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Gp49_Pectate_lyase_like | 0.73 | 64.0 | 5.63e-01 | 98.5% | 74.0% |
| 2485695 | 207.15.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › beta-helix of amnionless (AMN) extracellular domain › beta-helix of amnionless (AMN) extracellular domain › Amnionless | 0.65 | 47.0 | 4.25e-01 | 84.6% | 56.0% |
| 2485691 | 207.2.2.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › GP38 | 0.63 | 50.0 | 5.00e-01 | 90.8% | 100.0% |
| 2794363 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.61 | 53.0 | 4.15e-01 | 100.0% | 62.8% |
| 5065195 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.60 | 47.0 | 3.77e-01 | 92.3% | 42.0% |
| 4059026 | 2002.1.1.254 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH5_mannosidase | 0.60 | 49.0 | 3.08e-01 | 93.8% | 27.8% |
| 3466781 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.60 | 47.0 | 3.17e-01 | 89.2% | 25.9% |
| 5047496 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.58 | 46.0 | 4.46e-01 | 90.8% | 94.7% |
| 3437206 | 207.2.2.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › Glyco_hydro_28 | 0.57 | 47.0 | 4.15e-01 | 93.8% | 67.7% |
| None | — | 0.57 | 45.0 | 2.83e-01 | 89.2% | 53.1% |
D4
high
residues 619-703
D5
medium
residues 337-416
Domain cluster:
rep: OQ817844.1__WNO48467.1__X__00018__D80-160
D6
medium
residues 608-618_707-850
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.79 | 61.0 | 6.08e-01 | 95.5% | 78.3% |
| 1idjA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 71.0 | 5.33e-01 | 99.4% | 63.2% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 72.0 | 4.93e-01 | 100.0% | 51.7% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 72.0 | 5.36e-01 | 100.0% | 52.2% |
| 7o7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 71.0 | 5.17e-01 | 100.0% | 54.2% |
| 1rmgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 71.0 | 5.07e-01 | 100.0% | 41.2% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.76 | 59.0 | 5.89e-01 | 94.8% | 78.5% |
| 5gkqB01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 71.0 | 5.16e-01 | 100.0% | 53.9% |
| 4nk6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 71.0 | 5.07e-01 | 100.0% | 53.8% |
| 3gq8A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 71.0 | 4.94e-01 | 100.0% | 47.8% |
| 4hwvB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 70.0 | 4.87e-01 | 100.0% | 56.3% |
| 1ru4A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 70.0 | 5.11e-01 | 100.0% | 49.8% |
| 1vblA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 70.0 | 5.03e-01 | 100.0% | 57.7% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 70.0 | 5.37e-01 | 100.0% | 54.7% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 5.96e-01 | 100.0% | 85.0% |
| 1ogoX02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 5.09e-01 | 100.0% | 49.0% |
| 3eqnA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 67.0 | 5.07e-01 | 100.0% | 72.4% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.73 | 68.0 | 4.56e-01 | 100.0% | 34.4% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.73 | 60.0 | 5.99e-01 | 100.0% | 84.7% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.72 | 67.0 | 4.51e-01 | 100.0% | 53.4% |
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 65.0 | 4.97e-01 | 100.0% | 91.2% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 65.0 | 5.55e-01 | 100.0% | 83.8% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.69 | 43.0 | 5.30e-01 | 96.8% | 100.0% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 64.0 | 5.09e-01 | 100.0% | 69.0% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 58.0 | 5.57e-01 | 92.9% | 80.8% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.66 | 61.0 | 5.76e-01 | 100.0% | 84.3% |
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 59.0 | 4.34e-01 | 100.0% | 37.3% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.65 | 60.0 | 5.35e-01 | 100.0% | 89.4% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.64 | 57.0 | 5.31e-01 | 100.0% | 77.2% |
| 1ea0A04 | 2.160.20.60 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Glutamate synthase, alpha subunit, C-terminal domain | 0.63 | 58.0 | 4.78e-01 | 100.0% | 62.8% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 40.0 | 4.50e-01 | 81.9% | 87.7% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4406918 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.82 | 60.0 | 6.54e-01 | 99.4% | 89.2% |
| 5080165 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.80 | 71.0 | 5.58e-01 | 100.0% | 48.0% |
| 5005047 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.79 | 56.0 | 5.89e-01 | 100.0% | 80.0% |
| 5034985 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.79 | 70.0 | 6.50e-01 | 100.0% | 76.3% |
| 4932813 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.79 | 71.0 | 5.08e-01 | 95.5% | 54.0% |
| 5034990 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.79 | 71.0 | 5.18e-01 | 100.0% | 38.7% |
| 5045771 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.79 | 73.0 | 5.45e-01 | 100.0% | 44.1% |
| 4944812 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.79 | 72.0 | 6.40e-01 | 100.0% | 71.0% |
| 4954201 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.78 | 71.0 | 5.50e-01 | 100.0% | 46.9% |
| 4378528 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.77 | 50.0 | 6.07e-01 | 86.5% | 100.0% |
| 5033195 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.77 | 71.0 | 6.02e-01 | 100.0% | 61.9% |
| 5001276 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 72.0 | 5.67e-01 | 100.0% | 60.3% |
| 4940084 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.76 | 68.0 | 6.22e-01 | 100.0% | 74.9% |
| 5033475 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.76 | 72.0 | 5.85e-01 | 100.0% | 65.2% |
| 5060184 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.76 | 69.0 | 5.90e-01 | 100.0% | 63.4% |
| 4944820 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.76 | 71.0 | 5.78e-01 | 100.0% | 57.0% |
| 3435704 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 70.0 | 5.17e-01 | 100.0% | 56.4% |
| 4969388 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 71.0 | 5.34e-01 | 100.0% | 51.1% |
| 3546698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.75 | 66.0 | 6.58e-01 | 100.0% | 90.0% |
| 3965473 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 70.0 | 6.02e-01 | 100.0% | 67.7% |
| 5034599 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.75 | 71.0 | 5.21e-01 | 100.0% | 45.7% |
| 4383909 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 70.0 | 5.16e-01 | 100.0% | 59.5% |
| 5040393 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.75 | 71.0 | 5.99e-01 | 100.0% | 89.2% |
| 3586852 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 70.0 | 4.97e-01 | 100.0% | 51.6% |
| 5077579 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 70.0 | 5.26e-01 | 100.0% | 48.9% |
| 4981811 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 70.0 | 5.44e-01 | 100.0% | 52.1% |
| 5048579 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 70.0 | 5.32e-01 | 100.0% | 48.4% |
| 5034336 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 70.0 | 5.69e-01 | 100.0% | 58.1% |
| 4981702 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 70.0 | 5.23e-01 | 100.0% | 49.7% |
| 3974743 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.73 | 47.0 | 5.65e-01 | 88.4% | 99.0% |
| 4970242 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 5.95e-01 | 100.0% | 81.3% |
| 4972664 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 5.47e-01 | 100.0% | 68.5% |
| 3260502 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 5.45e-01 | 100.0% | 61.0% |
| 4980180 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 5.37e-01 | 100.0% | 55.8% |
| 4981826 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 4.70e-01 | 100.0% | 32.5% |
| 3428314 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.73 | 68.0 | 5.46e-01 | 100.0% | 64.9% |
| 4937200 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 60.0 | 6.17e-01 | 100.0% | 90.7% |
| 3522065 | 208.2.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Epiglycanin_TR | 0.72 | 52.0 | 3.98e-01 | 100.0% | 34.8% |
| 5062821 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 67.0 | 4.69e-01 | 100.0% | 45.6% |
| 3596944 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.71 | 49.0 | 4.92e-01 | 100.0% | 69.7% |
| 1503840 | 207.13.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix | 0.70 | 59.0 | 4.41e-01 | 100.0% | 38.0% |
| 5021887 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.70 | 66.0 | 5.65e-01 | 100.0% | 68.1% |
| 1680013 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.67 | 58.0 | 5.76e-01 | 97.4% | 88.2% |
| 3810649 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 62.0 | 4.55e-01 | 100.0% | 41.2% |
| 3855439 | 207.8.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD | 0.67 | 61.0 | 4.99e-01 | 100.0% | 65.3% |
| 4915825 | 207.6.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind,HCBP_related | 0.64 | 53.0 | 5.19e-01 | 87.7% | 82.1% |
| 3517885 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.64 | 51.0 | 4.83e-01 | 98.7% | 72.2% |
| 3621708 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.62 | 56.0 | 5.40e-01 | 100.0% | 85.4% |
| 1380294 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.51 | 39.0 | 4.31e-01 | 96.8% | 100.0% |
D7
medium
residues 851-1134
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.72 | 47.0 | 5.64e-01 | 93.0% | 95.4% |
| 3jurA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 60.0 | 5.11e-01 | 90.1% | 55.6% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 48.0 | 5.67e-01 | 82.0% | 100.0% |
| 3eqnA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 60.0 | 5.46e-01 | 94.0% | 94.5% |
| 2w7zA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.66 | 44.0 | 5.09e-01 | 97.2% | 92.3% |
| 2inuA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 62.0 | 5.43e-01 | 100.0% | 85.5% |
| 7b7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.64 | 61.0 | 5.47e-01 | 100.0% | 96.8% |
| 5gkqB01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.64 | 60.0 | 5.30e-01 | 99.6% | 89.5% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.63 | 53.0 | 4.90e-01 | 87.3% | 71.1% |
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 53.0 | 4.94e-01 | 87.7% | 83.9% |
| 1k5cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 58.0 | 5.52e-01 | 98.6% | 94.3% |
| 3vmvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 56.0 | 5.36e-01 | 94.4% | 84.3% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.61 | 57.0 | 4.70e-01 | 99.6% | 84.8% |
| 4hwvB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.61 | 54.0 | 4.50e-01 | 94.4% | 83.2% |
| 3n6zA01 | 2.160.20.110 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 51.0 | 5.34e-01 | 88.7% | 95.5% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 48.0 | 4.85e-01 | 81.3% | 100.0% |
| 1jtaA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 53.0 | 4.93e-01 | 94.7% | 80.3% |
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 54.0 | 5.03e-01 | 95.1% | 94.4% |
| 2odlA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.60 | 55.0 | 5.06e-01 | 100.0% | 100.0% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.59 | 44.0 | 4.85e-01 | 90.5% | 94.2% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 54.0 | 4.13e-01 | 100.0% | 61.4% |
| 1vblA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.58 | 54.0 | 4.74e-01 | 100.0% | 84.1% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 49.0 | 4.09e-01 | 100.0% | 52.0% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 39.0 | 4.69e-01 | 83.1% | 100.0% |
| 5z8xA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.57 | 48.0 | 4.56e-01 | 98.9% | 75.6% |
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.56 | 51.0 | 4.56e-01 | 96.5% | 78.6% |
| 3p4gD00 | 2.160.20.160 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.56 | 53.0 | 5.12e-01 | 100.0% | 92.9% |
| 3cvrA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.53 | 40.0 | 4.37e-01 | 99.6% | 94.0% |
| 1af0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.52 | 40.0 | 4.33e-01 | 85.6% | 93.2% |
| 4pufA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.51 | 44.0 | 4.29e-01 | 97.5% | 83.6% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4554798 | 207.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase | 0.72 | 49.0 | 5.62e-01 | 82.7% | 91.9% |
| 3914295 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.70 | 41.0 | 5.19e-01 | 94.4% | 93.1% |
| 4202478 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.68 | 51.0 | 4.97e-01 | 87.3% | 69.5% |
| 3695217 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.68 | 50.0 | 5.22e-01 | 98.2% | 81.5% |
| 3252360 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 64.0 | 5.33e-01 | 100.0% | 83.9% |
| 5026189 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.65 | 53.0 | 4.73e-01 | 84.2% | 74.6% |
| 3502358 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.65 | 42.0 | 4.98e-01 | 100.0% | 92.0% |
| 3272854 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.64 | 56.0 | 5.82e-01 | 92.3% | 97.7% |
| 4027109 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.64 | 60.0 | 5.61e-01 | 100.0% | 93.4% |
| 3263727 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.63 | 57.0 | 5.17e-01 | 94.4% | 72.5% |
| None | — | 0.63 | 52.0 | 4.65e-01 | 87.7% | 62.1% | |
| 185219 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.63 | 57.0 | 5.16e-01 | 95.4% | 83.6% |
| 2453323 | 207.2.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_49,IPU_b_solenoid,B_solenoid_dext | 0.62 | 59.0 | 5.25e-01 | 100.0% | 83.4% |
| 4371237 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.60 | 52.0 | 5.37e-01 | 100.0% | 97.4% |
| 3982331 | 207.1.1.18 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › TTSSLRR | 0.59 | 43.0 | 4.32e-01 | 98.2% | 72.4% |
| 3840065 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.57 | 44.0 | 4.83e-01 | 98.2% | 97.8% |
| 3255404 | 207.2.1.72 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29671 | 0.56 | 53.0 | 4.42e-01 | 100.0% | 60.9% |
| 4953596 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.56 | 48.0 | 5.03e-01 | 93.3% | 100.0% |
| 3165270 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.54 | 45.0 | 4.72e-01 | 99.6% | 95.0% |
| 3742302 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.53 | 48.0 | 3.98e-01 | 97.9% | 55.7% |
| 4498099 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.51 | 39.0 | 4.13e-01 | 83.8% | 88.6% |