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MN047793.1__QDJ96317.1__Xoosp13_130__00130
Bact-VirMN047793.1__QDJ96317.1__Xoosp13_130__00130
Identity
- Accession:
- MN047793 ↗
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-123
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 32.0 | 3.52e-01 | 100.0% | 63.2% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.59 | 40.0 | 3.79e-01 | 70.9% | 92.4% |
| 3mtvA02 | 3.90.70.70 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Arterivirus papain-like cysteine protease beta domain | 0.59 | 30.0 | 2.96e-01 | 94.0% | 43.1% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 28.0 | 3.59e-01 | 97.4% | 86.4% |
| 2kt2A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 29.0 | 3.66e-01 | 96.6% | 91.3% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.53 | 35.0 | 3.82e-01 | 100.0% | 81.2% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 28.0 | 3.44e-01 | 99.1% | 81.3% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 29.0 | 3.39e-01 | 97.4% | 75.3% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 34.0 | 3.87e-01 | 94.0% | 88.5% |
| 1u8xX02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 28.0 | 2.20e-01 | 72.6% | 23.0% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 30.0 | 2.16e-01 | 80.3% | 18.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3621974 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.61 | 32.0 | 3.97e-01 | 96.6% | 81.3% |
| 3592723 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.56 | 30.0 | 3.36e-01 | 94.0% | 65.3% |
| 5037293 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.55 | 28.0 | 3.58e-01 | 96.6% | 84.3% |
| 3723383 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.54 | 31.0 | 3.68e-01 | 76.9% | 82.5% |
| 5056226 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.53 | 29.0 | 3.58e-01 | 97.4% | 87.1% |
| 4134039 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.53 | 29.0 | 3.58e-01 | 97.4% | 84.0% |
| 4998201 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.53 | 33.0 | 3.78e-01 | 97.4% | 84.7% |
| 5024285 | 3501.1.1.2 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 | 0.53 | 29.0 | 3.77e-01 | 94.0% | 98.5% |
| 4975506 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.52 | 29.0 | 3.51e-01 | 96.6% | 84.0% |
| 5017559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 22.0 | 2.92e-01 | 97.4% | 70.8% |
| 5036264 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.51 | 29.0 | 3.08e-01 | 93.2% | 61.0% |
| 3956508 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.51 | 30.0 | 3.53e-01 | 96.6% | 85.0% |
| 3966338 | 327.16.1.19 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › NRho | 0.50 | 25.0 | 3.38e-01 | 98.3% | 100.0% |
| 5050894 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.50 | 36.0 | 2.88e-01 | 74.4% | 90.0% |
D2
high
residues 128-220
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xw3A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.73 | 52.0 | 5.21e-01 | 74.2% | 84.4% |
| 2hwjA01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.71 | 51.0 | 4.61e-01 | 75.3% | 62.7% |
| 1vk1A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.63 | 51.0 | 4.99e-01 | 98.9% | 78.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1842312 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.82 | 62.0 | 6.46e-01 | 78.5% | 90.7% |
| 3945776 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.81 | 59.0 | 5.88e-01 | 75.3% | 83.2% |
| 5073795 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.79 | 57.0 | 5.08e-01 | 74.2% | 88.8% |
| 5071247 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.78 | 55.0 | 5.11e-01 | 73.1% | 87.0% |
| 4929132 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.77 | 54.0 | 5.41e-01 | 73.1% | 86.3% |
| 3280315 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.76 | 52.0 | 5.46e-01 | 71.0% | 83.5% |
| 5049279 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.75 | 54.0 | 5.25e-01 | 74.2% | 89.0% |
| 3946729 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.75 | 54.0 | 5.40e-01 | 75.3% | 94.7% |
| 5010421 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.74 | 54.0 | 4.83e-01 | 75.3% | 58.1% |
| 2841795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.74 | 53.0 | 5.45e-01 | 75.3% | 86.7% |
| 5000279 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.73 | 51.0 | 4.29e-01 | 72.0% | 46.7% |
| 4977391 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.73 | 52.0 | 5.16e-01 | 73.1% | 74.7% |
| 5055163 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.73 | 53.0 | 4.45e-01 | 75.3% | 48.7% |
| 4995365 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.72 | 50.0 | 4.46e-01 | 72.0% | 53.8% |
| 7603 | 876.1.1.2 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc_2 | 0.71 | 51.0 | 5.36e-01 | 75.3% | 91.9% |
| 5031965 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.68 | 54.0 | 4.32e-01 | 100.0% | 44.6% |
| 85732 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.68 | 49.0 | 4.48e-01 | 75.3% | 71.1% |
| 2061501 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.64 | 51.0 | 5.03e-01 | 98.9% | 80.8% |
| 2387795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.63 | 50.0 | 5.23e-01 | 100.0% | 90.8% |