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MN047793.1__QDJ96578.1__Xoosp13_392__00392
Bact-VirMN047793.1__QDJ96578.1__Xoosp13_392__00392
Identity
- Accession:
- MN047793 ↗
- Kingdom:
- phage
Quality
95.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-116
Domain cluster:
rep: PH2015_22_scaffold_1_prodigal-single.1__X__X__00132__D172-250
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fnrA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 45.0 | 3.24e-01 | 90.7% | 35.2% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.52 | 38.0 | 3.08e-01 | 76.9% | 51.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595118 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 46.0 | 3.19e-01 | 93.5% | 67.8% |
| 4939185 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 36.0 | 3.48e-01 | 71.3% | 84.2% |
D2
high
residues 122-191
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.71 | 41.0 | 3.88e-01 | 100.0% | 47.1% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.71 | 56.0 | 5.23e-01 | 85.7% | 91.9% |
| 1pwuA04 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.69 | 41.0 | 2.84e-01 | 100.0% | 18.6% |
| 2ckwA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.67 | 51.0 | 4.30e-01 | 81.4% | 61.2% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.64 | 44.0 | 4.33e-01 | 100.0% | 65.4% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.63 | 42.0 | 3.94e-01 | 100.0% | 55.2% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 39.0 | 3.58e-01 | 100.0% | 48.4% |
| 2xheA03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.62 | 46.0 | 3.89e-01 | 80.0% | 46.3% |
| 1sv0D00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.60 | 41.0 | 3.93e-01 | 70.0% | 82.7% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 48.0 | 4.93e-01 | 95.7% | 100.0% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.58 | 40.0 | 3.91e-01 | 71.4% | 97.4% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 48.0 | 4.65e-01 | 94.3% | 100.0% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.57 | 51.0 | 4.71e-01 | 100.0% | 81.1% |
| 3ns4A00 | 1.10.357.110 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus | 0.56 | 37.0 | 2.71e-01 | 100.0% | 23.4% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.56 | 41.0 | 3.65e-01 | 100.0% | 56.8% |
| 2fdrA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 48.0 | 4.96e-01 | 98.6% | 100.0% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 50.0 | 5.01e-01 | 100.0% | 97.2% |
| 1ni5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 39.0 | 2.81e-01 | 78.6% | 83.3% |
| 4u2vA02 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 32.0 | 3.13e-01 | 91.4% | 53.8% |
| 2af6A02 | 6.10.140.450 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 37.0 | 3.92e-01 | 75.7% | 98.4% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 46.0 | 3.45e-01 | 100.0% | 64.5% |
| 4n6cB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 46.0 | 3.39e-01 | 100.0% | 67.4% |
| 2ah5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 41.0 | 4.26e-01 | 100.0% | 100.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580409 | 3826.1.1.26 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › RRP36 | 0.73 | 46.0 | 3.69e-01 | 100.0% | 33.3% |
| 4960526 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.70 | 47.0 | 4.49e-01 | 100.0% | 60.0% |
| 3823991 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.68 | 46.0 | 4.06e-01 | 71.4% | 83.8% |
| 4361465 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.66 | 39.0 | 3.93e-01 | 92.9% | 58.6% |
| 4486248 | 3586.1.1.0 ↗ | alpha arrays › Protelomerase stirrup domain › Protelomerase stirrup domain › Protelomerase stirrup domain | 0.65 | 41.0 | 4.02e-01 | 92.9% | 60.0% |
| 3892014 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.61 | 51.0 | 5.06e-01 | 92.9% | 100.0% |
| 3897820 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 51.0 | 5.02e-01 | 92.9% | 100.0% |
| 3673397 | 3238.1.1.1 ↗ | alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › mTERF | 0.61 | 51.0 | 3.15e-01 | 98.6% | 21.9% |
| 3988157 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.60 | 51.0 | 3.86e-01 | 100.0% | 56.3% |
| 5032563 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.60 | 42.0 | 3.60e-01 | 74.3% | 81.7% |
| 5072615 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.59 | 46.0 | 4.03e-01 | 85.7% | 82.7% |
| 3358706 | 3238.1.1.1 ↗ | alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › mTERF | 0.59 | 46.0 | 3.59e-01 | 90.0% | 39.1% |
| 3526105 | 604.3.1.18 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27519 | 0.59 | 37.0 | 3.44e-01 | 95.7% | 50.0% |
| 3732984 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.58 | 37.0 | 3.63e-01 | 95.7% | 58.7% |
| 3830109 | 3238.1.1.1 ↗ | alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › mTERF | 0.58 | 47.0 | 3.68e-01 | 92.9% | 55.8% |
| 4974099 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.56 | 48.0 | 3.42e-01 | 92.9% | 34.4% |
| 4972578 | 109.23.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 | 0.55 | 39.0 | 3.51e-01 | 85.7% | 52.5% |
| 4100489 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.54 | 40.0 | 2.86e-01 | 80.0% | 84.4% |
| 3420431 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.54 | 40.0 | 3.78e-01 | 94.3% | 64.7% |
| 2577269 | 7103.1.1.1 ↗ | alpha arrays › MJ1004, C-terminal domain › MJ1004, C-terminal domain › MJ1004, C-terminal domain › PF31224 | 0.54 | 44.0 | 4.14e-01 | 94.3% | 78.2% |
| 3262410 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.54 | 35.0 | 3.42e-01 | 92.9% | 61.3% |
| 3719206 | 102.1.2.8 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HHH,HhH-GPD | 0.54 | 42.0 | 3.07e-01 | 88.6% | 65.1% |
| 3671252 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 37.0 | 3.35e-01 | 90.0% | 50.5% |
| 3926598 | 5059.1.1.17 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TMEM234 | 0.53 | 46.0 | 3.77e-01 | 97.1% | 96.9% |
| 143664 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.53 | 47.0 | 3.22e-01 | 100.0% | 74.1% |
| 3372712 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.52 | 36.0 | 3.13e-01 | 100.0% | 45.5% |
| 3170621 | 3755.3.1.305 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook | 0.52 | 39.0 | 3.38e-01 | 100.0% | 53.3% |