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MN061582.1__QFR59036.1__X__00051

Bact-Vir

MN061582.1__QFR59036.1__X__00051

Identity

Accession:
MN061582 ↗
Kingdom:
phage

Quality

74.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Friunavirus› Acinetobacter_phage_vB_AbaP_IME546

TaxID: 2608405

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 117-259
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1quqB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 27.0 3.01e-01 85.3% 53.5%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.57 25.0 3.03e-01 73.4% 58.9%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.56 31.0 3.57e-01 83.2% 72.4%
2kmgA00 3.30.70.3580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein 0.56 37.0 3.77e-01 83.2% 67.6%
1qr0A01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.55 37.0 4.00e-01 78.3% 79.2%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.54 35.0 4.16e-01 79.0% 100.0%
1id0A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 37.0 3.76e-01 72.7% 97.3%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 36.0 3.78e-01 71.3% 93.2%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 3.22e-01 86.7% 50.8%
3c9fA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.51 36.0 2.84e-01 72.7% 89.2%
2pmeA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 35.0 2.71e-01 70.6% 37.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5016556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 29.0 3.63e-01 76.9% 65.6%
3492286 301.8.1.3 ↗ a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N 0.64 37.0 4.23e-01 73.4% 76.7%
3493325 148.1.3.8 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.62 43.0 4.53e-01 70.6% 97.7%
3267456 301.8.1.3 ↗ a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N 0.58 38.0 4.02e-01 76.2% 75.2%
5012485 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.55 26.0 3.31e-01 77.6% 78.7%
3705434 241.10.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.54 34.0 4.06e-01 85.3% 95.8%
4984000 231.1.1.1 ↗ a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_1 0.54 42.0 2.83e-01 82.5% 22.3%
3776727 5.1.4.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 0.52 42.0 2.98e-01 86.7% 35.5%
3936380 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 42.0 3.05e-01 85.3% 51.7%
3241917 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 41.0 3.27e-01 85.3% 50.5%
3695617 5.1.3.137 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.51 41.0 3.10e-01 86.0% 76.5%
3843500 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.87e-01 85.3% 44.8%
4022986 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.50 40.0 3.05e-01 86.0% 73.1%
D2 medium residues 288-395
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.63 21.0 3.00e-01 70.4% 60.8%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 23.0 2.90e-01 88.9% 60.6%
5zi7A02 3.30.2010.30 Alpha Beta › 2-Layer Sandwich › Zincin-like › 0.53 36.0 4.01e-01 94.4% 89.4%
1h8mA00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.53 41.0 3.85e-01 85.2% 90.0%
3b34A02 3.30.2010.30 Alpha Beta › 2-Layer Sandwich › Zincin-like › 0.52 36.0 4.00e-01 94.4% 89.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586911 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.52 29.0 3.14e-01 91.7% 63.2%
5030460 1.1.2.23 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat 0.51 40.0 2.67e-01 85.2% 45.9%
4437052 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.50 37.0 3.37e-01 77.8% 87.3%
4176001 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.50 37.0 3.30e-01 77.8% 84.3%
D3 medium residues 396-502
PDB
Domain cluster: rep: NC_023570.1__YP_009006534.1__Petty_37__00037__D844-938