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MN062188.1__QEG09393.1__CPT_Saba_020__00020

Bact-Vir

MN062188.1__QEG09393.1__CPT_Saba_020__00020

Identity

Accession:
MN062188 ↗
Kingdom:
phage

Quality

95.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Cenphatecvirus› Proteus_phage_Saba

TaxID: 2596672

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-61
PDB
Domain cluster: rep: JQ340774.2__AFB84085.1__X__00074__D2-58
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 68.0 6.37e-01 100.0% 74.6%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 68.0 6.49e-01 100.0% 79.4%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 58.0 5.61e-01 100.0% 68.2%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 72.0 6.76e-01 100.0% 81.7%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.80 71.0 7.14e-01 98.3% 96.7%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 5.86e-01 100.0% 58.0%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.55e-01 100.0% 79.5%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.23e-01 100.0% 70.7%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 65.0 6.02e-01 100.0% 71.6%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 69.0 6.61e-01 100.0% 85.3%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 69.0 6.39e-01 100.0% 80.0%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 69.0 6.28e-01 100.0% 80.8%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 68.0 6.16e-01 100.0% 82.3%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 67.0 6.04e-01 100.0% 84.0%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 63.0 5.94e-01 100.0% 79.2%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 5.38e-01 100.0% 57.1%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 57.0 5.77e-01 100.0% 86.2%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 6.08e-01 100.0% 86.4%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 5.88e-01 100.0% 78.9%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.04e-01 94.9% 61.4%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.73e-01 100.0% 90.9%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 5.85e-01 100.0% 78.7%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 5.81e-01 100.0% 84.2%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.65 57.0 4.94e-01 100.0% 67.7%
1nvpD02 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.64 44.0 4.79e-01 74.6% 97.8%
1nh2C00 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.61 43.0 4.60e-01 76.3% 90.0%
2dleA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 37.0 3.28e-01 100.0% 41.9%
4f0lB01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.56 39.0 3.33e-01 74.6% 57.5%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 42.0 2.74e-01 100.0% 18.7%
3lrrA00 2.170.150.30 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain 0.54 44.0 3.68e-01 100.0% 76.9%
2vxtI00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 42.0 3.25e-01 93.2% 96.8%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.53e-01 100.0% 68.5%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 44.0 3.53e-01 100.0% 88.6%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3244451 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.84 74.0 6.35e-01 100.0% 63.3%
4024322 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 75.0 6.87e-01 100.0% 81.3%
3621457 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.81 73.0 6.90e-01 100.0% 84.3%
3786067 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.81 73.0 6.57e-01 100.0% 80.0%
3915752 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.81 73.0 6.31e-01 100.0% 71.1%
4029154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 73.0 5.73e-01 100.0% 52.1%
4932541 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.81 71.0 6.59e-01 100.0% 78.1%
3277139 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.80 73.0 5.78e-01 100.0% 53.0%
3167351 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.80 69.0 6.07e-01 100.0% 64.8%
4974641 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.80 69.0 6.53e-01 100.0% 81.4%
3995481 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.79 72.0 5.97e-01 100.0% 60.0%
1175040 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.79 71.0 7.10e-01 98.3% 96.7%
3595291 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.21e-01 100.0% 65.6%
3518029 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.79 72.0 5.95e-01 100.0% 59.0%
4937731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 58.0 5.85e-01 96.6% 78.3%
3712963 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.79 71.0 6.07e-01 100.0% 62.8%
5066515 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.73e-01 98.3% 87.7%
3398219 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.78 70.0 5.98e-01 100.0% 64.2%
3911065 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 66.0 5.96e-01 100.0% 68.8%
5077846 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.78 67.0 6.23e-01 100.0% 76.0%
3712189 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.78 70.0 6.05e-01 100.0% 72.2%
3643592 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.78 68.0 6.31e-01 100.0% 77.3%
4013487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 5.59e-01 98.3% 62.7%
3645922 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.78 68.0 5.07e-01 100.0% 40.0%
4938115 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.77 69.0 6.43e-01 100.0% 82.4%
4575051 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.77 67.0 6.04e-01 100.0% 71.2%
4983255 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.77 67.0 6.17e-01 100.0% 76.0%
3271407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 6.08e-01 100.0% 70.6%
5036497 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.77 68.0 6.15e-01 100.0% 72.5%
3710540 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.77 68.0 6.32e-01 100.0% 85.3%
4987003 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.77 64.0 6.22e-01 100.0% 84.6%
4013632 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 69.0 6.25e-01 100.0% 75.6%
3712122 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.76 65.0 5.78e-01 100.0% 67.1%
4948069 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 6.26e-01 100.0% 78.7%
3270749 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.75 67.0 6.05e-01 100.0% 77.5%
5026934 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.75 66.0 5.99e-01 100.0% 72.5%
3593314 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.85e-01 100.0% 71.2%
3703320 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.75 66.0 6.04e-01 100.0% 83.5%
3341533 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.75 65.0 5.62e-01 100.0% 74.7%
2632533 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.74 66.0 6.31e-01 100.0% 88.4%
3665119 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.74 64.0 5.86e-01 98.3% 81.2%
3971321 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.74 60.0 5.71e-01 100.0% 75.4%
3254881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 5.91e-01 96.6% 82.7%
166026 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.74 63.0 5.97e-01 100.0% 79.2%
5081091 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.60e-01 100.0% 84.2%
409204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.74 65.0 5.40e-01 100.0% 57.3%
4990442 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.73 66.0 5.93e-01 100.0% 73.8%
4932286 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.73 65.0 6.11e-01 100.0% 80.8%
184917 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.73 63.0 5.26e-01 100.0% 56.4%
1549365 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 64.0 5.72e-01 100.0% 73.5%
3505097 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 63.0 5.61e-01 100.0% 71.8%
478 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.71 63.0 5.85e-01 100.0% 78.7%
4993070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.81e-01 100.0% 92.0%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 59.0 5.23e-01 100.0% 76.5%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 59.0 5.35e-01 100.0% 80.0%
4109046 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 58.0 5.13e-01 100.0% 81.2%
3210897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.00e-01 100.0% 70.6%
5034351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 5.03e-01 98.3% 90.9%
4929001 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.35e-01 100.0% 95.4%
4477722 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 43.0 3.90e-01 81.4% 62.4%
3975284 4167.1.1.1 ↗ beta complex topology › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › LlgE_F_G_D1 0.52 45.0 3.33e-01 94.9% 85.5%
3969727 897.2.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Protein E › Protein E 0.52 42.0 3.32e-01 100.0% 76.7%