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MN062704.1__QDP44155.1__SEA_JUJU_39__00039

Bact-Vir

MN062704.1__QDP44155.1__SEA_JUJU_39__00039

Identity

Accession:
MN062704 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-35_84-122_142-163
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2auaA01 3.20.170.10 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › ADP-ribosylation domain 0.74 69.0 6.62e-01 100.0% 88.9%
2hw2A00 3.20.170.40 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Rifampin ADP-ribosyltransferase domain 0.66 60.0 5.29e-01 99.0% 72.5%
1eq9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 34.0 3.31e-01 100.0% 57.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5082578 237.1.1.16 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF2441 0.90 83.0 6.53e-01 95.8% 100.0%
4050976 1.1.9.30 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0179 0.55 31.0 3.48e-01 100.0% 70.7%
3888826 2.1.1.255 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31100 0.51 45.0 3.97e-01 100.0% 93.8%
D2 medium residues 36-83_123-141
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t6gB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.59 40.0 3.23e-01 70.1% 75.4%
1mdyA00 4.10.280.10 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain 0.59 35.0 3.56e-01 80.6% 58.8%
2ejqB00 3.30.2010.20 Alpha Beta › 2-Layer Sandwich › Zincin-like › 0.58 40.0 3.42e-01 71.6% 90.4%
7px0A01 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.53 36.0 3.05e-01 70.1% 90.8%
2aboA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.53 36.0 2.91e-01 70.1% 64.9%
3buxB01 1.20.930.20 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain 0.53 45.0 3.73e-01 100.0% 93.8%
1xfiA02 1.20.1700.10 Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like 0.52 37.0 3.42e-01 76.1% 91.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3362444 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.58 40.0 2.59e-01 71.6% 24.4%
4978395 191.1.1.10 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_6 0.55 37.0 3.10e-01 70.1% 80.0%
3781056 4156.1.1.4 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.55 37.0 2.87e-01 70.1% 71.0%
5040380 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 46.0 3.15e-01 98.5% 86.2%
3742369 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.53 38.0 3.75e-01 74.6% 74.3%
3602723 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 35.0 2.95e-01 70.1% 57.4%