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MN062716.1__QDP45165.1__SEA_MAYWEATHER_3__00003

Bact-Vir

MN062716.1__QDP45165.1__SEA_MAYWEATHER_3__00003

Identity

Accession:
MN062716 ↗
Kingdom:
phage

Quality

83.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-44
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vkgA11 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.65 53.0 3.94e-01 95.1% 45.5%
6qm7J00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.61 53.0 3.39e-01 97.6% 33.3%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.61 49.0 3.93e-01 97.6% 47.9%
1jlcB04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 51.0 4.47e-01 100.0% 85.9%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.55 46.0 4.32e-01 97.6% 80.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3787585 5086.1.1.87 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.70 49.0 3.64e-01 75.6% 33.3%
3166044 101.1.11.7 alpha arrays › HTH › HTH › Ribbon-helix-helix › RelB 0.61 48.0 3.82e-01 100.0% 41.1%
3599690 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 47.0 2.55e-01 90.2% 4.7%
3818755 101.1.1.138 alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.57 45.0 3.63e-01 100.0% 42.1%