Back to structures

MN062720.1__QDP45498.1__SEA_FUZZBUSTER_14__00014

Bact-Vir

MN062720.1__QDP45498.1__SEA_FUZZBUSTER_14__00014

Identity

Accession:
MN062720 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-92
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 48.0 4.22e-01 98.0% 50.0%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.05e-01 100.0% 48.0%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 3.55e-01 100.0% 49.7%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.59 37.0 3.12e-01 100.0% 33.0%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.84e-01 100.0% 46.2%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 49.0 3.57e-01 100.0% 35.4%
2orzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 49.0 3.58e-01 100.0% 35.1%
3etbL00 2.60.40.810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 50.0 3.68e-01 100.0% 46.2%
1js8B02 2.60.310.10 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain 0.57 48.0 3.91e-01 100.0% 62.9%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 49.0 3.49e-01 98.0% 41.0%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.57 46.0 3.93e-01 100.0% 83.0%
7aj6H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.67e-01 100.0% 56.3%
5l0qB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.79e-01 100.0% 56.5%
3b34A04 2.60.40.1840 Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain 0.55 46.0 3.80e-01 100.0% 53.9%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.70e-01 100.0% 57.1%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 3.64e-01 100.0% 51.7%
5c50B00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.55 49.0 3.32e-01 100.0% 41.1%
3b8fB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 45.0 3.38e-01 100.0% 42.3%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 46.0 3.88e-01 100.0% 88.0%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 44.0 3.56e-01 96.1% 99.1%
1epfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 3.78e-01 100.0% 56.2%
2r5oA01 2.70.50.60 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain 0.54 44.0 3.29e-01 100.0% 43.7%
8ezmH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.56e-01 100.0% 58.9%
4lesA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.21e-01 96.1% 47.9%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.46e-01 100.0% 49.0%
8gk4C02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.51 39.0 3.38e-01 92.2% 100.0%
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.51 41.0 2.90e-01 100.0% 30.2%
5t89X05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.36e-01 98.0% 60.0%
2wadA02 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.51 40.0 3.01e-01 100.0% 31.8%
2qh7B01 3.40.5.90 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › CDGSH iron-sulfur domain, mitoNEET-type 0.51 34.0 3.46e-01 100.0% 76.6%
2gy5A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.47e-01 98.0% 53.5%
3vtiA03 3.90.870.40 Alpha Beta › Alpha-Beta Complex › DHBP synthase › 0.50 41.0 3.29e-01 98.0% 73.6%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 40.0 2.91e-01 98.0% 30.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5072403 375.5.1.0 few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like 0.66 49.0 5.20e-01 100.0% 91.1%
3915532 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 45.0 3.80e-01 100.0% 46.3%
3633918 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 49.0 3.83e-01 100.0% 40.8%
1164 10.32.1.19 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC 0.59 48.0 3.85e-01 100.0% 46.6%
5040431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.24e-01 100.0% 58.8%
4954768 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 3.90e-01 98.0% 52.9%
3177414 4076.1.1.2 a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.58 42.0 4.25e-01 100.0% 84.0%
4941983 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 47.0 3.58e-01 100.0% 44.3%
2323826 4187.2.1.1 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.57 45.0 4.08e-01 96.1% 66.7%
4930532 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 3.56e-01 100.0% 54.5%
3935807 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.56 45.0 3.80e-01 100.0% 52.2%
5010420 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.55 47.0 3.78e-01 100.0% 100.0%
3184485 76.1.1.0 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.55 46.0 3.69e-01 100.0% 50.9%
3629626 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 45.0 3.39e-01 100.0% 37.9%
3938782 10.32.1.207 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1-like_3rd 0.53 45.0 3.21e-01 100.0% 34.9%
3868444 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.53 43.0 3.41e-01 100.0% 41.6%
4427418 11.1.1.1229 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27268 0.53 46.0 3.79e-01 100.0% 75.8%
4000175 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 40.0 3.48e-01 96.1% 51.8%
3920306 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.52 42.0 3.27e-01 100.0% 40.7%
184690 11.22.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Dispersin › Dispersin › CellEnv_BiogenAssoc 0.52 41.0 3.46e-01 100.0% 49.0%
3561651 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.52 43.0 3.88e-01 94.1% 68.6%
4969854 284.1.1.1 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.51 40.0 3.26e-01 98.0% 81.3%
5044223 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 43.0 3.55e-01 98.0% 61.0%
3680066 10.10.1.5 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 0.51 42.0 3.11e-01 100.0% 41.9%
3849644 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.51 42.0 3.23e-01 100.0% 41.5%
3881480 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 41.0 3.57e-01 100.0% 57.8%
4615735 10.32.1.274 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27453 0.50 40.0 3.36e-01 100.0% 52.4%
4948100 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.50 39.0 2.45e-01 96.1% 15.7%
2640865 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 41.0 4.11e-01 100.0% 100.0%