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MN062720.1__QDP45564.1__SEA_FUZZBUSTER_80__00080

Bact-Vir

MN062720.1__QDP45564.1__SEA_FUZZBUSTER_80__00080

Identity

Accession:
MN062720 ↗
Kingdom:
phage

Quality

77.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-80
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 54.0 4.53e-01 92.7% 46.9%
2ql8A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.67 59.0 4.36e-01 98.2% 42.9%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 50.0 4.25e-01 85.5% 67.7%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 59.0 4.04e-01 100.0% 98.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 47.0 4.14e-01 81.8% 50.6%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 39.0 3.05e-01 80.0% 27.1%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 38.0 2.97e-01 72.7% 26.5%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.64 44.0 3.67e-01 72.7% 66.0%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.63 41.0 4.18e-01 81.8% 69.8%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.61 48.0 3.80e-01 89.1% 48.4%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 37.0 2.89e-01 72.7% 26.4%
4o1gA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 45.0 2.77e-01 78.2% 91.3%
4dzoA02 3.30.457.60 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.61 47.0 4.34e-01 90.9% 100.0%
2e8eA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.60 50.0 3.92e-01 98.2% 42.4%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.60 39.0 4.06e-01 81.8% 72.5%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.68e-01 100.0% 39.3%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.59 38.0 3.95e-01 81.8% 72.5%
2jxwA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 34.0 3.10e-01 80.0% 40.0%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.58 38.0 3.91e-01 81.8% 72.5%
1ye8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 3.51e-01 98.2% 36.8%
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 34.0 3.86e-01 85.5% 93.9%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 3.58e-01 98.2% 39.3%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.58 52.0 3.57e-01 100.0% 88.3%
4pqdA00 3.90.570.10 Alpha Beta › Alpha-Beta Complex › Sugar Binding Protein, Amyloid A4 Protein; Chain A › Amyloidogenic glycoprotein, heparin-binding domain 0.58 41.0 3.49e-01 80.0% 50.5%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.57 39.0 2.50e-01 74.5% 33.6%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.57 50.0 3.45e-01 100.0% 59.8%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 38.0 3.49e-01 80.0% 53.4%
6vddD01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 49.0 3.40e-01 100.0% 54.4%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 39.0 3.71e-01 78.2% 70.1%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 3.66e-01 96.4% 77.1%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.54 42.0 2.94e-01 87.3% 67.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 36.0 3.50e-01 72.7% 66.7%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 46.0 3.86e-01 98.2% 68.0%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 40.0 3.19e-01 80.0% 42.5%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 36.0 3.33e-01 70.9% 59.5%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 35.0 3.44e-01 70.9% 70.8%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 42.0 3.74e-01 83.6% 100.0%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 36.0 3.47e-01 83.6% 61.2%
6ilsA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 46.0 2.85e-01 98.2% 22.4%
2hlzA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 42.0 2.65e-01 89.1% 84.8%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.62e-01 83.6% 66.7%
3k0yA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.52 35.0 3.36e-01 70.9% 86.2%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976684 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.78 66.0 5.84e-01 98.2% 65.0%
5064569 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.77 56.0 3.95e-01 80.0% 53.1%
5005258 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.75 55.0 3.74e-01 80.0% 42.4%
3773509 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.75 62.0 6.03e-01 100.0% 83.3%
7726 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.72 58.0 5.74e-01 89.1% 86.2%
3313320 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 53.0 4.22e-01 83.6% 84.3%
4962459 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 51.0 4.45e-01 85.5% 56.8%
4325664 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.66 51.0 4.96e-01 85.5% 76.7%
4228205 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.66 59.0 4.31e-01 98.2% 45.0%
None 0.66 47.0 2.89e-01 74.5% 18.4%
4553383 319.1.1.27 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF5450 0.66 46.0 4.35e-01 92.7% 60.0%
4322616 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.65 55.0 3.62e-01 92.7% 24.3%
4938355 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.63 55.0 4.10e-01 100.0% 49.7%
3797728 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 4.46e-01 96.4% 60.0%
5022356 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.63 45.0 4.54e-01 76.4% 89.1%
3943510 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.63 45.0 2.84e-01 78.2% 18.4%
3597539 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 47.0 2.94e-01 85.5% 27.5%
5022847 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.62 46.0 4.17e-01 80.0% 84.0%
3964178 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.62 54.0 4.07e-01 98.2% 46.7%
5061294 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.62 52.0 3.98e-01 96.4% 46.7%
4350934 2484.1.1.55 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom 0.62 50.0 3.49e-01 92.7% 32.0%
5035446 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.61 41.0 4.11e-01 81.8% 69.1%
5070602 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.61 52.0 3.95e-01 98.2% 46.4%
4494257 2484.1.1.55 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom 0.61 51.0 3.60e-01 94.5% 42.2%
2870939 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.60 49.0 3.08e-01 90.9% 36.8%
4279317 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.60 45.0 2.59e-01 80.0% 10.6%
5008972 2005.1.1.17 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.60 45.0 2.59e-01 80.0% 10.6%
5024508 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.59 49.0 3.65e-01 96.4% 38.7%
4032952 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.59 47.0 3.14e-01 89.1% 21.3%
4940177 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.39e-01 90.9% 91.4%
3481608 279.1.1.0 a+b complex topology › LDH C-terminal domain-like › LDH C-terminal domain-like › LDH C-terminal domain-like 0.58 50.0 3.49e-01 98.2% 32.6%
1884741 4.1.1.130 beta barrels › SH3 › SH3 › SH3 › SH3_19 0.58 39.0 3.87e-01 72.7% 64.4%
3659103 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.58 38.0 3.95e-01 81.8% 74.0%
3967064 5.1.5.140 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › T4P_PilY1 0.58 49.0 2.79e-01 98.2% 14.2%
4944767 101.1.2.883 alpha arrays › HTH › HTH › winged helix domain › Radical_SAM 0.57 43.0 3.93e-01 83.6% 98.7%
5075666 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.57 45.0 2.87e-01 90.9% 39.9%
5055783 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.56 46.0 3.89e-01 89.1% 96.7%
3953675 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.56 40.0 3.92e-01 80.0% 75.4%
3912274 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.55 46.0 4.33e-01 98.2% 75.7%
3958051 324.1.1.0 a+b two layers › OsmC-like › OsmC-like › OsmC-like 0.54 44.0 3.48e-01 98.2% 40.7%
1952792 7569.1.1.1 a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.54 43.0 2.85e-01 89.1% 76.1%
3722737 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.18e-01 94.5% 44.8%
3774338 292.2.1.6 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.53 46.0 3.67e-01 96.4% 48.2%
3284357 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.53 43.0 3.47e-01 100.0% 42.3%
4949453 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.53 39.0 3.72e-01 80.0% 81.5%
3601544 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 43.0 2.44e-01 89.1% 9.7%
3554886 5.1.4.155 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 0.52 38.0 2.37e-01 81.8% 87.7%
3599142 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 38.0 3.72e-01 80.0% 81.7%
4928472 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.52 42.0 3.73e-01 90.9% 95.0%
224080 2.14.1.2 beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › CHS5_N 0.52 41.0 3.67e-01 85.5% 98.7%
3741705 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 40.0 2.61e-01 90.9% 30.5%
1949626 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.51 38.0 3.74e-01 81.8% 83.1%
4032670 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 40.0 2.61e-01 98.2% 16.9%
4933326 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.51 42.0 3.74e-01 100.0% 92.0%
3291448 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 3.67e-01 98.2% 94.4%