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MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083

Bact-Vir

MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083

Identity

Accession:
MN062720 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hodgkinviridae› Fuzzbustervirus› Microbacterium_phage_FuzzBuster

TaxID: 2590935

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 229-325
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.68 37.0 4.10e-01 95.9% 65.4%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.66 46.0 4.46e-01 73.2% 98.2%
3u4qA02 1.10.274.50 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.65 44.0 3.82e-01 70.1% 60.7%
3m1mA03 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.65 55.0 5.31e-01 93.8% 98.2%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.65 48.0 4.35e-01 80.4% 100.0%
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.63 43.0 4.54e-01 71.1% 88.6%
4ix7A00 1.10.10.2590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain 0.63 51.0 4.88e-01 87.6% 91.2%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 52.0 3.97e-01 90.7% 78.7%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 36.0 3.51e-01 80.4% 50.9%
1elkA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 43.0 3.77e-01 72.2% 47.7%
1f0lA02 1.10.490.40 Mainly Alpha › Orthogonal Bundle › Globin-like › Diphtheria toxin, translocation domain 0.62 53.0 4.46e-01 99.0% 95.5%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.61 52.0 4.58e-01 93.8% 90.2%
1li5A02 1.20.120.640 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.60 42.0 4.42e-01 73.2% 87.4%
3tt9A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 42.0 3.19e-01 72.2% 30.5%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.60 39.0 4.45e-01 73.2% 95.5%
2hxiB02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 42.0 3.83e-01 76.3% 82.8%
1z9hA03 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 41.0 3.61e-01 74.2% 92.7%
3iv3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 45.0 3.11e-01 82.5% 60.7%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 43.0 3.67e-01 77.3% 90.1%
4l7aA00 3.40.390.70 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › 0.57 45.0 3.32e-01 86.6% 44.4%
3c02A00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.56 46.0 3.53e-01 91.8% 94.2%
8gy0A01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 44.0 3.23e-01 86.6% 44.8%
6wk3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 47.0 4.12e-01 92.8% 77.2%
6z74C02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.55 41.0 3.49e-01 78.4% 83.6%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 45.0 3.29e-01 90.7% 98.2%
4nq1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 43.0 3.12e-01 85.6% 44.5%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 41.0 3.65e-01 78.4% 94.1%
3qnfA04 1.10.3480.20 Mainly Alpha › Orthogonal Bundle › TorD-like › 0.55 38.0 3.18e-01 72.2% 88.7%
3o8jA02 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.54 38.0 3.79e-01 72.2% 84.8%
1ls1A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.54 34.0 3.59e-01 72.2% 69.7%
7w5gA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 43.0 2.99e-01 88.7% 38.9%
4q69B00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 42.0 2.79e-01 88.7% 71.3%
3tqgB01 1.10.580.10 Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 0.53 43.0 3.32e-01 93.8% 71.8%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.52 38.0 3.59e-01 74.2% 68.1%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 44.0 3.92e-01 92.8% 79.1%
2yi9A05 1.20.1270.270 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain 0.51 31.0 3.46e-01 75.3% 76.6%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3927848 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.72 51.0 3.68e-01 72.2% 78.4%
3185102 6155.1.1.0 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.67 54.0 4.83e-01 86.6% 70.4%
4283500 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 45.0 3.85e-01 73.2% 70.6%
3649278 4015.1.1.1 ↗ alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 0.64 51.0 3.70e-01 86.6% 39.6%
5055527 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.64 49.0 3.26e-01 82.5% 19.8%
5016155 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 42.0 4.09e-01 71.1% 59.1%
3631102 109.4.1.170 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N 0.63 46.0 3.25e-01 76.3% 24.3%
3890439 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 45.0 4.15e-01 75.3% 81.6%
3601984 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.62 42.0 3.94e-01 70.1% 61.7%
4062443 140.1.1.7 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.61 45.0 4.01e-01 77.3% 65.7%
3497940 109.4.1.1655 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, HEAT, HEAT_2 0.61 42.0 2.87e-01 72.2% 26.7%
4030167 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.61 50.0 4.17e-01 90.7% 97.1%
3604847 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 47.0 3.96e-01 84.5% 86.7%
4056158 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 43.0 4.18e-01 77.3% 81.8%
3504602 109.4.1.19 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vitellogenin_N 0.59 42.0 2.87e-01 80.4% 19.2%
3584274 109.4.1.1663 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTI1, TPR_TTI1_C 0.59 42.0 2.92e-01 76.3% 49.3%
4365575 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 48.0 3.62e-01 92.8% 87.3%
4960208 4156.1.1.1 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 0.58 42.0 3.83e-01 76.3% 91.9%
3228159 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 42.0 3.65e-01 75.3% 69.3%
3487223 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 41.0 4.19e-01 73.2% 96.8%
3518439 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 45.0 2.68e-01 86.6% 76.6%
3969040 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.55 43.0 3.22e-01 84.5% 74.1%
3390731 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.55 40.0 3.28e-01 75.3% 44.0%
4347120 109.4.1.37 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BRO1 0.54 41.0 2.85e-01 82.5% 94.4%
3583302 633.23.1.4 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.54 41.0 3.61e-01 79.4% 73.6%
3581844 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.54 41.0 3.65e-01 84.5% 58.7%
3773789 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.53 40.0 3.53e-01 83.5% 53.3%
4026893 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 38.0 2.98e-01 75.3% 81.0%
4225517 2008.1.1.59 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.52 36.0 2.80e-01 71.1% 47.7%
3355330 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.50 40.0 3.58e-01 93.8% 60.0%
D2 high residues 395-492
PDB
Domain cluster: rep: MH834603.1__AYN57327.1__PBI_BRIDGETTE_61__00061__D383-477
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.69 37.0 4.69e-01 70.4% 89.5%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.58 34.0 3.56e-01 93.9% 60.2%
2felA00 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.57 45.0 3.09e-01 82.7% 88.4%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.57 32.0 3.49e-01 71.4% 64.6%
4v19K02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.57 39.0 4.31e-01 89.8% 93.3%
2c2jA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 44.0 3.73e-01 83.7% 81.2%
1inpA02 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.56 50.0 4.07e-01 100.0% 88.8%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 44.0 3.62e-01 83.7% 76.6%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 35.0 3.42e-01 70.4% 57.8%
3u50C01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 36.0 3.32e-01 72.4% 51.2%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.54 35.0 3.87e-01 86.7% 84.4%
3p1uA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 42.0 2.69e-01 83.7% 18.4%
4otpA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 43.0 3.83e-01 88.8% 68.5%
4wqoD00 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.53 42.0 3.74e-01 86.7% 85.1%
1vmgA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.52 33.0 3.63e-01 87.8% 78.0%
8gr2A01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 41.0 3.28e-01 83.7% 67.7%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 33.0 3.72e-01 80.6% 86.3%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 35.0 3.65e-01 70.4% 78.7%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 38.0 3.00e-01 99.0% 36.0%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3954609 101.1.2.749 ↗ alpha arrays › HTH › HTH › winged helix domain › D5_N 0.81 70.0 7.13e-01 91.8% 98.9%
5052887 604.4.1.0 ↗ alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP 0.61 44.0 4.84e-01 90.8% 93.8%
3202986 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 38.0 3.53e-01 70.4% 50.4%
5015560 10.28.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.60 42.0 3.93e-01 90.8% 57.6%
3265214 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 38.0 3.62e-01 70.4% 54.8%
3056876 167.1.1.0 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 0.59 41.0 4.00e-01 73.5% 75.0%
2979134 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.59 41.0 4.00e-01 73.5% 75.0%
4939253 10.28.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.59 43.0 4.07e-01 90.8% 63.3%
4112182 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 37.0 3.52e-01 70.4% 53.4%
5004339 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 41.0 3.44e-01 72.4% 95.8%
4224821 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 36.0 3.44e-01 70.4% 54.8%
4181293 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 36.0 3.50e-01 70.4% 57.3%
3963163 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.56 47.0 4.06e-01 91.8% 91.6%
4538262 5051.1.1.3 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF 0.55 48.0 3.04e-01 100.0% 50.5%
60305 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.55 35.0 3.45e-01 70.4% 59.4%
5055517 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.55 46.0 4.10e-01 95.9% 65.0%
3459699 633.4.1.0 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.54 40.0 3.46e-01 78.6% 63.9%
3485296 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.54 36.0 3.54e-01 70.4% 62.9%
4001028 10.28.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.53 39.0 3.45e-01 75.5% 80.7%
3406518 5054.1.1.61 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › ELO 0.53 41.0 3.14e-01 83.7% 66.8%
3742843 10.28.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.52 37.0 3.36e-01 75.5% 79.3%
3786162 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.51 35.0 3.59e-01 70.4% 76.8%
5031480 283.1.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.51 45.0 3.33e-01 96.9% 96.9%
3323987 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.51 39.0 3.47e-01 81.6% 69.7%
3612510 171.1.1.0 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like 0.50 41.0 3.14e-01 92.9% 55.8%
D3 high residues 765-843
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 75.0 7.68e-01 100.0% 97.4%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.98e-01 97.5% 62.9%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.59e-01 98.7% 80.0%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.21e-01 98.7% 70.9%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.45e-01 97.5% 77.6%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.52e-01 98.7% 82.4%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.01e-01 97.5% 68.9%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.59e-01 98.7% 61.2%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 5.13e-01 97.5% 91.4%
4esjA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.93e-01 97.5% 75.6%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.61e-01 97.5% 69.7%
3sykA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 37.0 3.55e-01 78.5% 51.1%
1wfxA01 1.10.10.970 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain 0.62 50.0 5.22e-01 97.5% 98.6%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.52e-01 97.5% 72.4%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.12e-01 97.5% 54.2%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.78e-01 97.5% 99.1%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.62e-01 97.5% 40.7%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 39.0 3.99e-01 96.2% 74.4%
2mbfA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.48e-01 97.5% 83.5%
4pcwC00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 41.0 3.98e-01 91.1% 70.3%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 43.0 4.48e-01 92.4% 90.7%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.54 37.0 3.84e-01 96.2% 76.0%
1qd1B02 3.30.70.670 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain 0.54 45.0 3.67e-01 91.1% 57.9%
4ne4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 43.0 3.37e-01 87.3% 43.7%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.53 37.0 3.96e-01 96.2% 86.8%
1bg1A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 46.0 3.99e-01 97.5% 65.6%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 33.0 3.25e-01 81.0% 60.0%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.51 37.0 2.83e-01 77.2% 72.9%
1eg3A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 43.0 4.16e-01 100.0% 85.7%
2qmwA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 36.0 3.49e-01 92.4% 65.6%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.50 41.0 3.23e-01 93.7% 75.0%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.90 80.0 8.22e-01 98.7% 98.7%
5035043 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 76.0 7.81e-01 96.2% 100.0%
3688358 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.86 74.0 7.43e-01 98.7% 91.3%
5029778 101.1.2.43 ↗ alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.86 79.0 7.54e-01 100.0% 86.7%
3954610 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 72.0 7.42e-01 100.0% 94.7%
3883278 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.84 74.0 6.96e-01 100.0% 78.9%
3729476 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.84 73.0 6.36e-01 100.0% 64.3%
3480455 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 75.0 7.47e-01 100.0% 97.5%
3498779 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.82 74.0 7.25e-01 100.0% 91.8%
4012878 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 70.0 6.15e-01 100.0% 64.3%
3177239 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.81 71.0 5.89e-01 100.0% 55.6%
3743842 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 72.0 6.61e-01 100.0% 79.0%
4022514 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 6.03e-01 100.0% 74.5%
4980135 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.29e-01 97.5% 63.0%
5052010 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 5.75e-01 97.5% 85.0%
4943354 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.82e-01 97.5% 87.3%
4961270 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 63.0 5.72e-01 98.7% 80.0%
4945942 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.34e-01 98.7% 67.3%
4503351 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 59.0 5.37e-01 98.7% 69.5%
5036311 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 61.0 5.68e-01 97.5% 77.0%
4284507 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 61.0 5.59e-01 97.5% 76.2%
4990676 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 61.0 5.48e-01 97.5% 72.7%
4976651 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 5.88e-01 97.5% 98.6%
5055466 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 62.0 5.46e-01 98.7% 80.0%
5011183 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 61.0 5.47e-01 97.5% 71.8%
5050129 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 62.0 5.52e-01 98.7% 78.2%
4955909 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 62.0 5.57e-01 100.0% 76.4%
4173782 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 61.0 5.37e-01 97.5% 68.7%
5029327 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 61.0 5.32e-01 98.7% 77.5%
5000349 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 62.0 5.38e-01 100.0% 86.7%
4943364 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 5.26e-01 98.7% 68.3%
4928669 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 60.0 5.47e-01 97.5% 72.4%
4974161 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 60.0 5.17e-01 97.5% 62.9%
5003874 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 60.0 5.24e-01 97.5% 66.7%
4978533 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 56.0 4.73e-01 97.5% 53.3%
4487383 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 61.0 5.50e-01 100.0% 91.8%
5077022 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 55.0 5.08e-01 97.5% 69.0%
5026783 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 60.0 5.54e-01 97.5% 78.0%
4109840 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 59.0 5.45e-01 97.5% 76.0%
4373647 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 60.0 5.22e-01 97.5% 65.0%
4956520 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 61.0 5.44e-01 98.7% 71.8%
3875839 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 59.0 5.17e-01 97.5% 65.2%
4392375 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 59.0 5.34e-01 97.5% 70.9%
4314672 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 58.0 5.30e-01 98.7% 71.4%
5073929 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 60.0 5.39e-01 98.7% 73.6%
4975513 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 60.0 5.35e-01 98.7% 76.4%
4997123 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.67 53.0 3.98e-01 97.5% 34.0%
4961841 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 60.0 5.11e-01 100.0% 83.8%
5027116 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 60.0 5.28e-01 98.7% 75.7%
4971686 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 53.0 4.84e-01 97.5% 64.8%
5045315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 4.97e-01 98.7% 63.5%
4966192 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 60.0 5.28e-01 98.7% 69.6%
4203701 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 59.0 5.01e-01 97.5% 61.2%
4979490 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 59.0 5.19e-01 100.0% 85.0%
5081950 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 59.0 5.20e-01 98.7% 71.3%
4997121 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 49.0 3.71e-01 98.7% 32.6%
5065786 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 59.0 5.13e-01 98.7% 68.3%
5049515 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 57.0 5.10e-01 97.5% 68.7%
4933997 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 59.0 5.14e-01 100.0% 86.7%
4061942 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 59.0 5.06e-01 98.7% 66.4%
3625612 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 58.0 5.35e-01 97.5% 76.0%
4672256 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 58.0 5.13e-01 97.5% 68.7%
4962870 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 58.0 5.00e-01 97.5% 63.4%
4982781 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 58.0 5.24e-01 98.7% 75.5%
5065308 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 58.0 5.06e-01 98.7% 71.7%
3479163 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 57.0 4.87e-01 97.5% 65.4%
4948099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 5.20e-01 98.7% 78.2%
4994794 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 5.29e-01 97.5% 92.0%
4926913 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.65 51.0 3.94e-01 97.5% 38.3%
4975759 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.65 48.0 3.63e-01 98.7% 32.6%
4983039 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 57.0 5.31e-01 98.7% 81.8%
4999546 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 51.0 4.88e-01 97.5% 72.6%
3927517 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 56.0 5.24e-01 97.5% 77.0%
4978855 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 51.0 4.48e-01 98.7% 57.5%
3649376 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 55.0 4.50e-01 97.5% 50.7%
4934055 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 50.0 5.08e-01 97.5% 85.0%
5005164 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 56.0 5.07e-01 98.7% 74.1%
5078667 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.64 47.0 4.12e-01 98.7% 51.7%
4971464 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.63 46.0 4.14e-01 98.7% 53.9%
3283775 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.63 46.0 3.55e-01 97.5% 33.9%
4982703 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.63 46.0 4.47e-01 98.7% 68.9%
3285723 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 51.0 4.07e-01 97.5% 41.7%
3286725 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 51.0 3.95e-01 97.5% 38.9%
3282515 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.63 47.0 3.67e-01 97.5% 36.6%
219927 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.63 46.0 3.62e-01 98.7% 35.6%
3254841 101.1.2.198 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH 0.63 56.0 5.07e-01 98.7% 77.1%
5039090 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 45.0 4.26e-01 98.7% 62.0%
3278037 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 50.0 3.84e-01 97.5% 36.9%
4959935 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 45.0 3.49e-01 98.7% 33.5%
4926977 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 45.0 4.11e-01 98.7% 56.4%
4941856 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 45.0 4.07e-01 97.5% 56.4%
3279209 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 50.0 3.96e-01 97.5% 41.7%
5047500 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 53.0 3.91e-01 97.5% 37.6%
3281879 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 49.0 3.85e-01 97.5% 40.0%
5065235 101.1.2.738 ↗ alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C 0.61 48.0 3.73e-01 97.5% 37.8%
3286277 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 49.0 3.87e-01 97.5% 40.6%
4959927 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 48.0 3.85e-01 98.7% 41.8%
5031481 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 44.0 4.01e-01 97.5% 56.4%
5047069 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 3.44e-01 98.7% 40.0%
5077319 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 46.0 3.53e-01 98.7% 44.2%
D4 medium residues 1-81
PDB
D5 medium residues 82-223
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09250.17 best Prim-Pol 29.7 1.20e-06 81.7% 65.2%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.54 37.0 4.30e-01 93.7% 96.2%
4a8xA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 31.0 3.83e-01 76.8% 97.7%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3182321 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.53 31.0 3.63e-01 83.8% 81.0%
3616684 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.53 37.0 4.14e-01 78.2% 92.7%
3701823 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 32.0 3.84e-01 77.5% 96.7%
3577459 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 30.0 3.75e-01 78.2% 96.5%
3621982 304.55.1.5 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep 0.51 34.0 3.81e-01 78.9% 88.2%
3728308 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.51 31.0 3.65e-01 78.9% 87.0%
D6 medium residues 506-567_723-746
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08706.17 best D5_N 23.8 6.90e-05 50.0% 27.2%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a62A01 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.63 25.0 3.45e-01 94.2% 69.6%
1td6A01 1.20.1480.10 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 0.57 41.0 3.89e-01 75.6% 93.1%
8sbeA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.52 44.0 3.48e-01 96.5% 79.1%
1jliA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.50 42.0 3.93e-01 94.2% 93.8%
1h0oA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.50 37.0 2.63e-01 79.1% 72.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4973289 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.89 84.0 5.76e-01 100.0% 90.9%
5029777 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.83 77.0 5.35e-01 100.0% 91.8%
4360283 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.54 46.0 3.45e-01 96.5% 78.7%
4344405 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 46.0 3.70e-01 97.7% 78.9%
D7 medium residues 568-722_747-764
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 40.0 7.70e-10 66.5% 100.0%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 63.0 5.91e-01 89.6% 70.3%
1svmA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 55.0 5.86e-01 76.3% 88.2%
1r6bX04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 52.0 5.02e-01 76.3% 80.7%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 49.0 5.26e-01 75.7% 91.3%
3vkgA17 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 43.0 4.98e-01 74.6% 91.1%
1g8pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 48.0 4.60e-01 75.1% 87.4%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 48.0 3.83e-01 76.3% 44.2%
3ja8204 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 4.65e-01 96.5% 81.6%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 47.0 4.26e-01 74.0% 84.1%
3vkgA10 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 47.0 4.52e-01 75.1% 81.6%
4r7zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 55.0 4.52e-01 97.1% 86.4%
1cr2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 4.49e-01 88.4% 85.4%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 44.0 4.89e-01 82.1% 97.8%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 51.0 4.47e-01 93.1% 91.2%
2cvhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 4.68e-01 93.1% 88.3%
4a1fB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 4.13e-01 93.1% 80.8%
2ekdA00 3.40.50.11570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 0.56 49.0 4.70e-01 93.1% 93.6%
8bnsD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.85e-01 96.0% 93.5%
3dxyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 31.0 2.98e-01 88.4% 46.4%
2gzaB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 4.41e-01 96.0% 79.3%
2qorA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 32.0 3.71e-01 95.4% 80.8%
1o2dA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 38.0 3.85e-01 74.6% 96.5%
2hzgA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 38.0 3.41e-01 75.1% 75.0%
2zadA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 39.0 3.56e-01 77.5% 90.0%
3pm6A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.84e-01 96.0% 93.7%
4rk0D01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 34.0 3.82e-01 87.9% 86.7%
3k9cB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 33.0 3.66e-01 87.9% 85.5%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4973289 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 83.0 6.97e-01 97.1% 71.3%
3954608 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.88 83.0 7.09e-01 98.8% 71.2%
5035042 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.85 80.0 6.72e-01 98.8% 70.9%
4959586 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.85 81.0 6.73e-01 100.0% 68.1%
5022020 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.83 79.0 6.67e-01 98.8% 72.1%
5029777 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.81 77.0 6.64e-01 99.4% 72.5%
3253892 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.81 63.0 6.07e-01 89.6% 71.3%
5081314 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 76.0 6.47e-01 100.0% 71.5%
5003620 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.79 76.0 5.92e-01 100.0% 54.6%
3945876 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.78 73.0 6.23e-01 98.8% 67.9%
2810781 8001.1.1.1 ↗ alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PPV_E1_C 0.77 61.0 5.54e-01 89.6% 63.8%
5011495 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 65.0 6.18e-01 98.3% 77.5%
4033843 2004.1.1.313 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VapE-like_dom 0.70 56.0 5.38e-01 89.6% 73.3%
5051024 2004.1.1.155 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 0.68 51.0 5.04e-01 76.3% 86.1%
3839744 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 58.0 4.97e-01 89.6% 68.3%
5058121 2004.1.1.1224 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF31144 0.67 61.0 5.03e-01 97.7% 71.0%
3981677 2004.1.1.22 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.67 49.0 4.37e-01 76.3% 63.3%
4353506 2004.1.1.66 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.66 53.0 4.63e-01 85.0% 84.6%
3702069 2004.1.1.181 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 0.65 53.0 4.93e-01 85.0% 77.5%
3962695 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 60.0 5.07e-01 100.0% 90.5%
3195074 2004.1.1.272 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA12 0.65 53.0 4.32e-01 85.5% 84.2%
4944736 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 52.0 4.71e-01 84.4% 83.0%
3211713 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 42.0 4.75e-01 75.1% 84.4%
3940178 2004.1.1.107 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.62 52.0 4.33e-01 88.4% 81.4%
4158189 2004.1.1.55 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA_helicase 0.61 51.0 5.29e-01 87.9% 98.8%
4971258 2004.1.1.790 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop 0.59 49.0 4.50e-01 89.0% 89.8%
4972728 2004.1.1.790 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop 0.58 48.0 4.55e-01 88.4% 96.2%
3192520 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.58 52.0 4.43e-01 96.5% 92.4%
3432927 2002.1.1.174 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.53 39.0 3.55e-01 77.5% 87.9%
5005062 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 47.0 3.33e-01 98.8% 53.8%
3170706 2004.1.1.284 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › tRNA_lig_kinase 0.52 43.0 3.91e-01 89.6% 92.8%