←Back to structures
MN065183.1__QDP43468.1__X__00023
Bact-VirMN065183.1__QDP43468.1__X__00023
Identity
- Accession:
- MN065183 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-62
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.74 | 44.0 | 4.83e-01 | 72.1% | 75.0% |
| 2m3aA00 | 1.10.10.1900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like | 0.70 | 32.0 | 3.08e-01 | 86.9% | 35.8% |
| 1miwA04 | 1.10.246.80 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 42.0 | 4.17e-01 | 72.1% | 59.4% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 43.0 | 4.16e-01 | 72.1% | 58.2% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 41.0 | 3.45e-01 | 86.9% | 38.2% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 52.0 | 4.55e-01 | 93.4% | 61.6% |
| 7y11B01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.63 | 44.0 | 4.35e-01 | 73.8% | 69.8% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.61 | 45.0 | 3.70e-01 | 85.2% | 40.2% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 41.0 | 4.10e-01 | 72.1% | 67.7% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 51.0 | 4.76e-01 | 100.0% | 92.1% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 47.0 | 3.61e-01 | 95.1% | 74.8% |
| 1ni7A00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.55 | 44.0 | 3.33e-01 | 88.5% | 87.2% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.54 | 46.0 | 4.51e-01 | 93.4% | 85.1% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 44.0 | 3.82e-01 | 100.0% | 67.6% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.22e-01 | 91.8% | 55.4% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 42.0 | 3.87e-01 | 93.4% | 70.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572021 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.73 | 43.0 | 4.24e-01 | 96.7% | 55.4% |
| 3914660 | 604.1.1.95 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KIAA1755_C | 0.69 | 43.0 | 3.79e-01 | 86.9% | 45.9% |
| 5042923 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 46.0 | 3.74e-01 | 72.1% | 38.3% |
| 3242626 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 41.0 | 3.77e-01 | 72.1% | 50.0% |
| 4329038 | 375.1.9.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Insulin | 0.61 | 47.0 | 4.18e-01 | 85.2% | 63.3% |
| 3423943 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.61 | 41.0 | 3.84e-01 | 72.1% | 60.0% |
| 3970705 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.60 | 42.0 | 3.84e-01 | 72.1% | 61.3% |
| 5063164 | 7566.1.1.0 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain | 0.58 | 51.0 | 3.72e-01 | 96.7% | 62.5% |
| 3871809 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.58 | 46.0 | 4.17e-01 | 88.5% | 63.5% |
| 3538509 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.56 | 48.0 | 3.93e-01 | 93.4% | 53.3% |
| 3610347 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.56 | 50.0 | 4.43e-01 | 96.7% | 98.8% |
| 3506153 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.56 | 47.0 | 4.27e-01 | 93.4% | 75.9% |
| 3864894 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.53 | 45.0 | 4.04e-01 | 93.4% | 75.3% |
| 4258385 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.53 | 45.0 | 4.19e-01 | 95.1% | 74.7% |
| 3313375 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.53 | 45.0 | 3.60e-01 | 93.4% | 48.7% |
| 4102250 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.52 | 44.0 | 3.98e-01 | 93.4% | 70.0% |
| 3470186 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.52 | 44.0 | 3.82e-01 | 93.4% | 62.2% |
| 3486506 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.51 | 43.0 | 4.04e-01 | 93.4% | 74.7% |