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MN065183.1__QDP43485.1__X__00040
Bact-VirMN065183.1__QDP43485.1__X__00040
Identity
- Accession:
- MN065183 ↗
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-99
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.63 | 51.0 | 4.61e-01 | 89.9% | 91.8% |
| 2n1rA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.60 | 49.0 | 4.16e-01 | 100.0% | 80.6% |
| 3brsA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 46.0 | 3.68e-01 | 88.4% | 85.4% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.57 | 38.0 | 3.63e-01 | 71.0% | 77.3% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 42.0 | 3.91e-01 | 82.6% | 64.1% |
| 6yigA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 43.0 | 4.03e-01 | 100.0% | 67.0% |
| 3fnrA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 40.0 | 3.14e-01 | 75.4% | 71.0% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.54 | 38.0 | 3.51e-01 | 76.8% | 56.0% |
| 1ngnA00 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.54 | 41.0 | 3.23e-01 | 81.2% | 57.6% |
| 4j7zF00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 43.0 | 3.89e-01 | 89.9% | 87.2% |
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.51 | 39.0 | 2.82e-01 | 81.2% | 88.5% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 40.0 | 3.46e-01 | 85.5% | 69.7% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.50 | 37.0 | 3.19e-01 | 76.8% | 94.4% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.50 | 33.0 | 3.19e-01 | 76.8% | 56.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934796 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.54 | 45.0 | 4.22e-01 | 98.6% | 90.0% |
| 5074064 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 45.0 | 3.28e-01 | 100.0% | 74.9% |
| 3432588 | 101.1.3.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 | 0.52 | 47.0 | 4.25e-01 | 100.0% | 81.7% |
| 4007651 | 6055.1.1.24 ↗ | extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › DUF1422 | 0.52 | 38.0 | 3.64e-01 | 76.8% | 96.2% |
| 5032538 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.52 | 45.0 | 3.74e-01 | 100.0% | 60.8% |
| 3194286 | 210.1.2.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT | 0.51 | 45.0 | 2.81e-01 | 100.0% | 55.5% |