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MN091626.1__QDJ97677.1__PALS2_052__00052

Bact-Vir

MN091626.1__QDJ97677.1__PALS2_052__00052

Identity

Accession:
MN091626 ↗
Kingdom:
phage

Quality

70.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 26-91
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.82 70.0 6.53e-01 93.9% 93.9%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 55.0 6.29e-01 77.3% 95.9%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 67.0 5.82e-01 93.9% 91.8%
4dkaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 66.0 5.97e-01 90.9% 95.3%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.77 56.0 5.48e-01 81.8% 70.4%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 65.0 5.37e-01 92.4% 64.7%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 65.0 5.68e-01 93.9% 89.8%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 52.0 5.60e-01 74.2% 85.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.74 55.0 5.51e-01 81.8% 77.6%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 60.0 4.98e-01 92.4% 83.3%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 60.0 5.27e-01 92.4% 82.5%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 60.0 5.36e-01 98.5% 89.7%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 57.0 5.29e-01 92.4% 98.8%
1gd7A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 58.0 4.96e-01 93.9% 80.7%
1lm0A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 57.0 4.97e-01 93.9% 70.3%
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.67 55.0 5.09e-01 92.4% 88.2%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 44.0 4.54e-01 92.4% 78.0%
4egvA02 2.40.50.840 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 53.0 5.07e-01 89.4% 90.7%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 54.0 4.81e-01 95.5% 97.9%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 50.0 4.07e-01 87.9% 87.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 48.0 4.60e-01 100.0% 73.3%
3go2A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 53.0 4.44e-01 97.0% 71.9%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.61 42.0 3.85e-01 95.5% 54.0%
3mlqH00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 36.0 4.19e-01 80.3% 90.5%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 51.0 4.31e-01 98.5% 68.9%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 50.0 4.20e-01 100.0% 75.2%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 45.0 3.78e-01 86.4% 93.8%
1a31A03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.57 49.0 3.79e-01 95.5% 58.0%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.57 38.0 3.08e-01 93.9% 34.8%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 48.0 4.14e-01 98.5% 81.1%
1ckmA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.57 49.0 3.80e-01 100.0% 63.9%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.56 45.0 3.62e-01 89.4% 80.0%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 47.0 3.79e-01 98.5% 62.5%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.56 48.0 4.02e-01 100.0% 81.0%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 41.0 3.11e-01 78.8% 85.9%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.56 44.0 3.53e-01 87.9% 63.2%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.58e-01 90.9% 47.1%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 42.0 2.74e-01 90.9% 56.1%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 43.0 2.91e-01 92.4% 89.6%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 41.0 3.78e-01 95.5% 63.7%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.52 41.0 3.80e-01 87.9% 75.0%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.73e-01 97.0% 63.7%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.51 42.0 3.34e-01 92.4% 98.5%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 41.0 3.46e-01 92.4% 94.9%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 42.0 2.71e-01 100.0% 32.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282644 2.24.1.2 beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF7489 0.88 74.0 7.53e-01 89.4% 92.3%
5030410 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.81 69.0 6.03e-01 90.9% 85.3%
5012082 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 66.0 5.79e-01 92.4% 92.6%
4213053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 68.0 5.96e-01 95.5% 81.1%
5043498 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.77 64.0 3.90e-01 89.4% 36.9%
4504110 2484.1.1.197 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 0.77 65.0 3.94e-01 92.4% 38.6%
5005284 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 64.0 5.62e-01 92.4% 94.7%
4997715 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.76 63.0 4.67e-01 92.4% 94.7%
3838219 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 62.0 5.75e-01 90.9% 87.1%
4942684 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 64.0 4.68e-01 92.4% 97.1%
4288334 2.2.1.13 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › DUF2278 0.75 67.0 4.63e-01 100.0% 86.4%
4995707 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 64.0 5.56e-01 93.9% 81.0%
3243378 2.1.1.347 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30115 0.75 63.0 5.52e-01 92.4% 64.3%
3788812 304.114.1.6 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › DNA_pol_B_exo1 0.75 63.0 4.29e-01 93.9% 72.9%
3588305 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 66.0 5.97e-01 98.5% 96.6%
5058885 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 63.0 4.68e-01 92.4% 53.1%
5035327 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 63.0 5.81e-01 93.9% 90.6%
3664617 2.1.1.223 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.74 57.0 5.31e-01 84.8% 74.1%
4988803 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.74 58.0 3.54e-01 84.8% 36.7%
5055355 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 61.0 5.52e-01 92.4% 93.3%
4959167 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 58.0 5.88e-01 86.4% 100.0%
5078973 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 59.0 5.55e-01 90.9% 95.0%
5047563 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 57.0 5.46e-01 86.4% 94.7%
5016167 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.72 64.0 4.77e-01 100.0% 58.2%
169352 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.72 60.0 5.03e-01 95.5% 86.4%
3172086 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.72 61.0 5.06e-01 93.9% 68.7%
4971091 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.71 60.0 4.74e-01 93.9% 85.2%
3166240 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 52.0 5.47e-01 80.3% 88.3%
4961380 4972.1.1.1 beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C 0.69 54.0 4.23e-01 83.3% 63.7%
5008070 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 55.0 4.56e-01 90.9% 64.0%
3650904 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 54.0 4.84e-01 86.4% 88.4%
4077485 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.68 53.0 5.36e-01 100.0% 86.2%
4526883 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.67 57.0 4.77e-01 93.9% 60.9%
3970435 101.1.2.379 alpha arrays › HTH › HTH › winged helix domain › NGO1945_C 0.67 56.0 4.56e-01 90.9% 93.3%
4423306 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.66 44.0 4.30e-01 92.4% 61.3%
5010618 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 49.0 5.00e-01 78.8% 85.7%
4929550 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.65 50.0 4.96e-01 84.8% 77.1%
5013051 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 4.02e-01 93.9% 42.3%
1117747 2.1.1.94 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C 0.65 53.0 5.07e-01 89.4% 90.7%
5021851 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.65 49.0 3.13e-01 83.3% 22.0%
5081878 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 52.0 3.28e-01 89.4% 35.3%
4547406 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.64 43.0 4.09e-01 92.4% 57.5%
3914347 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.64 49.0 3.98e-01 86.4% 83.0%
3604459 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.64 53.0 4.56e-01 95.5% 73.6%
3839369 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.63 42.0 4.00e-01 92.4% 57.5%
4945424 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 46.0 3.69e-01 78.8% 69.2%
3947044 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 50.0 4.89e-01 92.4% 92.0%
3612106 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 44.0 4.29e-01 93.9% 66.7%
3248985 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 51.0 4.20e-01 93.9% 72.3%
3787501 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 48.0 3.88e-01 87.9% 93.6%
5061951 66.1.1.4 beta sandwiches › ISP domain › ISP domain › ISP domain › FtrD-like 0.62 46.0 3.93e-01 83.3% 64.4%
4999027 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 55.0 5.29e-01 100.0% 98.7%
3933294 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 49.0 4.23e-01 87.9% 70.5%
4985735 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.60 51.0 4.58e-01 95.5% 78.9%
5064060 896.1.1.4 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 0.60 47.0 4.68e-01 92.4% 81.4%
5056886 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.59 43.0 3.06e-01 93.9% 25.4%
3622767 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.58 47.0 4.20e-01 89.4% 78.9%
3626321 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 42.0 4.53e-01 95.5% 94.5%
3241979 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.58 45.0 3.91e-01 90.9% 54.3%
3584249 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.57 43.0 3.73e-01 90.9% 50.0%
4462449 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.56 48.0 3.82e-01 95.5% 80.0%
3518158 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.55 46.0 3.57e-01 93.9% 46.7%
3969410 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.55 45.0 3.91e-01 100.0% 89.9%
4579655 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.55 43.0 2.61e-01 100.0% 13.3%
3388088 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.54 46.0 3.68e-01 95.5% 79.9%
3952939 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.54 44.0 4.23e-01 90.9% 97.3%
3958768 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 4.12e-01 92.4% 81.2%
4952863 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.50 41.0 3.30e-01 92.4% 95.6%