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MN094788.1__QDH83687.1__X__00124

Bact-Vir

MN094788.1__QDH83687.1__X__00124

Identity

Accession:
MN094788 ↗
Kingdom:
phage

Quality

72.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Moturavirus› Achromobacter_phage_Motura

TaxID: 2591403

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-112
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.61 42.0 4.62e-01 100.0% 91.3%
1konA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.60 45.0 4.84e-01 98.9% 94.7%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 35.0 4.28e-01 94.3% 96.4%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 33.0 3.93e-01 85.2% 97.9%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 34.0 3.85e-01 93.2% 82.3%
4ammA00 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.56 43.0 2.88e-01 100.0% 19.3%
1nm2A01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.56 40.0 4.37e-01 98.9% 98.5%
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 42.0 4.58e-01 92.0% 100.0%
4i0wA00 3.30.70.2980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 40.0 3.96e-01 96.6% 72.8%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.55 37.0 3.94e-01 93.2% 80.5%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 4.22e-01 98.9% 100.0%
6c80A03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.55 49.0 3.60e-01 98.9% 48.1%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 31.0 3.69e-01 85.2% 90.6%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.53 42.0 4.14e-01 97.7% 79.6%
6k2eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 4.11e-01 95.5% 98.5%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 47.0 4.43e-01 100.0% 85.0%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.67e-01 92.0% 74.4%
2bopA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 45.0 4.59e-01 97.7% 97.6%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 35.0 3.25e-01 70.5% 76.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 31.0 3.47e-01 86.4% 78.8%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 46.0 4.35e-01 100.0% 85.8%
2nuhA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 46.0 4.35e-01 100.0% 87.5%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 31.0 3.41e-01 87.5% 77.1%
6y48D01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 40.0 2.83e-01 87.5% 49.0%
5xzqF00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 43.0 4.19e-01 100.0% 99.0%
1iqzA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 38.0 3.95e-01 96.6% 91.4%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 37.0 4.45e-01 90.9% 96.4%
4940157 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.61 36.0 4.26e-01 85.2% 90.9%
3972551 304.4.1.59 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › WCX 0.61 41.0 4.37e-01 93.2% 81.3%
5026680 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.61 35.0 4.10e-01 90.9% 83.3%
3290985 304.169.1.3 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WCX 0.61 40.0 4.30e-01 94.3% 80.0%
3977126 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.60 37.0 4.55e-01 97.7% 100.0%
25624 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.60 35.0 4.47e-01 93.2% 100.0%
1710232 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.60 43.0 4.75e-01 98.9% 100.0%
3968342 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.60 36.0 4.43e-01 94.3% 100.0%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.60 36.0 4.24e-01 92.0% 94.5%
5027344 1170.1.1.0 ↗ beta barrels › IL8-related › IL8-related › IL8 0.59 36.0 4.31e-01 71.6% 96.4%
4439046 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.59 42.0 4.62e-01 96.6% 100.0%
5058457 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.59 35.0 3.95e-01 88.6% 78.5%
5033768 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.59 41.0 4.62e-01 95.5% 100.0%
3280640 304.4.1.59 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › WCX 0.58 40.0 4.23e-01 96.6% 82.7%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.58 36.0 3.93e-01 94.3% 78.6%
3283590 304.11.1.12 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › WCX 0.57 40.0 4.15e-01 93.2% 78.8%
5068610 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.56 39.0 4.12e-01 96.6% 82.7%
5023503 304.110.1.0 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.56 41.0 4.47e-01 100.0% 100.0%
3300074 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 33.0 3.90e-01 87.5% 94.4%
5083953 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.56 40.0 4.19e-01 97.7% 85.0%
3281273 304.169.1.3 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WCX 0.56 37.0 3.89e-01 92.0% 76.2%
3285818 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 38.0 4.21e-01 97.7% 96.9%
5007506 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.55 41.0 4.24e-01 100.0% 83.5%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.55 34.0 3.64e-01 86.4% 72.0%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 30.0 3.72e-01 70.5% 94.0%
5025261 304.57.1.0 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.55 39.0 3.99e-01 97.7% 77.6%
3267345 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.54 32.0 3.77e-01 88.6% 92.7%
5057658 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 36.0 4.02e-01 92.0% 100.0%
4889364 304.56.1.3 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › Cas3_I-F_Cas2 0.54 38.0 3.50e-01 95.5% 55.5%
3884178 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.53 32.0 3.44e-01 94.3% 69.3%
3573620 4.1.1.318 ↗ beta barrels › SH3 › SH3 › SH3 › PF26085 0.53 34.0 3.99e-01 73.9% 96.7%
4568770 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.53 39.0 4.00e-01 95.5% 81.2%
5008578 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.53 40.0 3.97e-01 97.7% 78.9%
1518821 304.7.1.8 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › ORF_2_N 0.53 37.0 3.30e-01 96.6% 49.2%
3185909 394.1.1.2 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_19 0.53 29.0 3.59e-01 92.0% 92.0%
5038997 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.53 37.0 4.14e-01 93.2% 100.0%
5060568 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.53 35.0 3.93e-01 92.0% 100.0%
3416070 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 41.0 2.77e-01 85.2% 39.4%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.52 34.0 3.27e-01 92.0% 57.0%
4179584 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.52 40.0 3.98e-01 100.0% 81.1%
4945067 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.52 39.0 3.93e-01 98.9% 80.0%
4321822 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.52 37.0 3.88e-01 95.5% 85.0%
3183315 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.52 39.0 2.73e-01 80.7% 85.1%
3587261 10.29.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins 0.51 42.0 3.89e-01 90.9% 70.4%
3779830 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.51 33.0 3.31e-01 89.8% 63.3%
5077602 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.51 40.0 2.84e-01 84.1% 63.7%
3556601 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.51 33.0 3.64e-01 89.8% 87.7%
3243143 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 33.0 3.62e-01 88.6% 87.7%
3669492 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.51 34.0 2.97e-01 89.8% 43.6%
4569736 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.51 44.0 4.00e-01 100.0% 100.0%
4944359 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.51 36.0 3.73e-01 97.7% 81.2%
5055159 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.50 35.0 3.96e-01 93.2% 100.0%