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MN095770.1__QFR57651.1__CPT_Slocum_071__00071
Bact-VirMN095770.1__QFR57651.1__CPT_Slocum_071__00071
Identity
- Accession:
- MN095770 ↗
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Taxonomy
TaxID: 2601679
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-76
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.70 | 35.0 | 4.28e-01 | 74.1% | 79.4% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 54.0 | 4.35e-01 | 93.1% | 49.2% |
| 4khbD02 | 2.30.29.220 | Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) | 0.64 | 53.0 | 4.82e-01 | 94.8% | 81.5% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 53.0 | 3.11e-01 | 91.4% | 20.6% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.63 | 51.0 | 4.56e-01 | 91.4% | 84.3% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.62 | 51.0 | 5.08e-01 | 93.1% | 91.5% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.62 | 48.0 | 4.87e-01 | 87.9% | 89.3% |
| 1inlC02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 47.0 | 4.64e-01 | 89.7% | 81.2% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 48.0 | 3.72e-01 | 100.0% | 40.3% |
| 4paaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 3.18e-01 | 91.4% | 69.4% |
| 4k22B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 48.0 | 3.23e-01 | 94.8% | 84.5% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.56 | 42.0 | 3.38e-01 | 86.2% | 72.5% |
| 8oqxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 46.0 | 3.74e-01 | 93.1% | 75.4% |
| 1dfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 3.40e-01 | 100.0% | 48.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 42.0 | 4.05e-01 | 84.5% | 76.5% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.54 | 38.0 | 2.92e-01 | 75.9% | 63.4% |
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 46.0 | 4.22e-01 | 93.1% | 77.3% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 42.0 | 4.03e-01 | 100.0% | 75.4% |
| 1lvoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 37.0 | 3.35e-01 | 79.3% | 84.1% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.51 | 45.0 | 3.18e-01 | 100.0% | 32.4% |
| 3ikhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 41.0 | 2.78e-01 | 100.0% | 84.3% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 42.0 | 2.67e-01 | 100.0% | 17.4% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 42.0 | 3.59e-01 | 98.3% | 87.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078825 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.75 | 45.0 | 2.84e-01 | 91.4% | 12.5% |
| 4935756 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.73 | 44.0 | 4.57e-01 | 96.6% | 65.5% |
| 3941913 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.70 | 41.0 | 4.25e-01 | 87.9% | 61.8% |
| 3800237 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 58.0 | 4.53e-01 | 93.1% | 43.2% |
| 4023242 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.67 | 53.0 | 4.27e-01 | 93.1% | 47.2% |
| 3996291 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.65 | 38.0 | 2.59e-01 | 100.0% | 15.5% |
| 3630385 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.60 | 51.0 | 4.18e-01 | 100.0% | 61.7% |
| 3587925 | 220.1.1.242 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EbsA | 0.60 | 49.0 | 4.54e-01 | 93.1% | 73.3% |
| 3964608 | 220.1.1.104 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin | 0.59 | 49.0 | 4.65e-01 | 93.1% | 77.1% |
| 3603043 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.57 | 48.0 | 4.23e-01 | 100.0% | 81.1% |
| 3625456 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.57 | 35.0 | 3.60e-01 | 74.1% | 62.1% |
| 3584393 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 35.0 | 2.64e-01 | 74.1% | 22.6% |
| 4580252 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.54 | 39.0 | 3.98e-01 | 84.5% | 80.0% |
| 4938677 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 2.78e-01 | 89.7% | 24.3% |
| 5003963 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.52 | 44.0 | 2.68e-01 | 96.6% | 17.3% |
| 3592448 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 42.0 | 2.70e-01 | 98.3% | 32.6% |