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MN096267.1__QDH93799.1__X__00027
Bact-VirMN096267.1__QDH93799.1__X__00027
Identity
- Accession:
- MN096267 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
TaxID: 2591408
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-57
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2auwA01 | 3.30.2020.10 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain | 0.71 | 47.0 | 3.78e-01 | 95.2% | 34.1% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.68 | 48.0 | 3.78e-01 | 92.9% | 35.2% |
| 2w3cA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 53.0 | 3.22e-01 | 92.9% | 32.2% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 47.0 | 3.66e-01 | 90.5% | 35.7% |
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.62 | 46.0 | 3.21e-01 | 85.7% | 26.2% |
| 3grlA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 49.0 | 2.76e-01 | 92.9% | 15.3% |
| 3spdA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.60 | 46.0 | 3.01e-01 | 88.1% | 60.5% |
| 2j6pA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 47.0 | 3.33e-01 | 90.5% | 76.6% |
| 4ioyX02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 40.0 | 3.05e-01 | 76.2% | 28.7% |
| 4fe9A01 | 2.60.40.3640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 39.0 | 2.94e-01 | 76.2% | 59.2% |
| 4fumA01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.56 | 38.0 | 3.31e-01 | 73.8% | 79.7% |
| 1y2mD01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.55 | 48.0 | 3.04e-01 | 100.0% | 43.6% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.54 | 37.0 | 3.74e-01 | 100.0% | 73.9% |
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.54 | 42.0 | 4.30e-01 | 88.1% | 97.4% |
| 2rqbA00 | 2.170.150.30 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain | 0.53 | 38.0 | 2.90e-01 | 90.5% | 78.5% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 35.0 | 2.64e-01 | 100.0% | 23.7% |
| 1w96A02 | 3.90.1770.10 | Alpha Beta › Alpha-Beta Complex › PreATP-grasp fold › PreATP-grasp domain | 0.52 | 39.0 | 3.91e-01 | 92.9% | 84.4% |
| 1gu2A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.52 | 36.0 | 2.75e-01 | 78.6% | 37.1% |
| 2lxwA00 | 6.10.250.1730 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 29.0 | 2.75e-01 | 95.2% | 38.2% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 37.0 | 3.78e-01 | 88.1% | 76.9% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 38.0 | 2.93e-01 | 92.9% | 56.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948622 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 53.0 | 5.28e-01 | 83.3% | 75.6% |
| 3820342 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.69 | 56.0 | 4.05e-01 | 90.5% | 37.4% |
| 3201380 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 55.0 | 5.23e-01 | 90.5% | 82.0% |
| 5031811 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 49.0 | 4.87e-01 | 97.6% | 73.3% |
| 3262730 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 50.0 | 4.89e-01 | 83.3% | 85.4% |
| 3543335 | 109.4.1.73 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Uso1_p115_head | 0.65 | 52.0 | 3.13e-01 | 92.9% | 28.7% |
| 4938178 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 45.0 | 4.59e-01 | 81.0% | 80.0% |
| 3368426 | 109.4.1.1472 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2, Thoc2, THOC2_N | 0.63 | 51.0 | 2.76e-01 | 100.0% | 11.2% |
| 3803838 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.63 | 53.0 | 4.57e-01 | 100.0% | 88.6% |
| 5072382 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 45.0 | 3.45e-01 | 90.5% | 34.0% |
| 3435151 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 38.0 | 4.01e-01 | 88.1% | 74.3% |
| 3562527 | 386.1.1.358 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451 | 0.59 | 45.0 | 4.12e-01 | 88.1% | 83.3% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.58 | 45.0 | 3.89e-01 | 92.9% | 85.3% |
| 3212573 | 708.1.2.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › RIG-I_C-RD | 0.58 | 45.0 | 3.37e-01 | 92.9% | 87.2% |
| 3811663 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.58 | 44.0 | 3.80e-01 | 92.9% | 71.2% |
| None | — | 0.58 | 45.0 | 4.13e-01 | 90.5% | 83.3% | |
| 3927123 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 45.0 | 3.07e-01 | 97.6% | 22.3% |
| 4660107 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.58 | 40.0 | 3.61e-01 | 73.8% | 93.3% |
| 3592489 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 39.0 | 3.59e-01 | 81.0% | 52.3% |
| 3406028 | 4044.1.1.12 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › RH_dom | 0.55 | 35.0 | 3.14e-01 | 85.7% | 43.3% |
| 3779926 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 38.0 | 3.24e-01 | 73.8% | 93.2% |
| 4002788 | 376.1.1.42 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zinc_ribbon_16 | 0.55 | 40.0 | 3.29e-01 | 85.7% | 78.9% |
| 4056471 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.55 | 45.0 | 3.66e-01 | 90.5% | 93.8% |
| 3664051 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 42.0 | 3.39e-01 | 92.9% | 54.7% |
| 3343538 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 42.0 | 3.65e-01 | 92.9% | 70.7% |
| 3787821 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 40.0 | 3.17e-01 | 88.1% | 34.3% |
| 3757718 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 37.0 | 3.78e-01 | 73.8% | 95.0% |
| 3607612 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 42.0 | 3.60e-01 | 88.1% | 91.4% |
| None | — | 0.53 | 36.0 | 3.44e-01 | 81.0% | 56.4% | |
| 3554885 | 5.1.4.234 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › zinc_ribbon_16 | 0.53 | 37.0 | 3.23e-01 | 81.0% | 65.0% |
| 3258241 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.52 | 40.0 | 4.03e-01 | 90.5% | 91.1% |
| 4024500 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 40.0 | 3.16e-01 | 92.9% | 96.0% |
| None | — | 0.51 | 35.0 | 3.27e-01 | 76.2% | 60.0% | |
| 3738662 | 376.1.1.42 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zinc_ribbon_16 | 0.50 | 39.0 | 3.04e-01 | 88.1% | 80.0% |