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MN096267.1__QDH93809.1__X__00037

Bact-Vir

MN096267.1__QDH93809.1__X__00037

Identity

Accession:
MN096267 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Detrevirus› Pseudomonas_phage_vB_PaS_IME307

TaxID: 2591408

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-64
PDB
Domain cluster: rep: KC460990.1__AGN89451.1__Eta_005__00005__D51-104
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.64 54.0 4.52e-01 100.0% 65.2%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 48.0 3.91e-01 85.0% 68.9%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.63 49.0 3.40e-01 86.7% 50.0%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 3.90e-01 88.3% 74.2%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 3.78e-01 81.7% 73.0%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.62 52.0 4.76e-01 100.0% 97.6%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.62 50.0 4.29e-01 98.3% 88.3%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 51.0 4.59e-01 96.7% 71.3%
1fgyA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 3.70e-01 83.3% 78.6%
1maiA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 49.0 3.94e-01 90.0% 79.8%
5u78C00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 3.77e-01 85.0% 84.5%
1eazA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 3.81e-01 83.3% 78.6%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 49.0 3.01e-01 100.0% 16.8%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 49.0 4.25e-01 100.0% 88.5%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 47.0 3.74e-01 88.3% 65.3%
2dfkC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 3.45e-01 83.3% 63.8%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.59 48.0 3.76e-01 95.0% 93.0%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.59 46.0 3.89e-01 91.7% 51.5%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.58 48.0 3.81e-01 100.0% 58.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.71e-01 95.0% 90.0%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.66e-01 86.7% 73.3%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.52e-01 83.3% 69.6%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.57 47.0 3.47e-01 100.0% 47.3%
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.52e-01 85.0% 63.6%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 47.0 4.06e-01 100.0% 97.1%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 3.82e-01 100.0% 51.9%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.56 48.0 4.16e-01 96.7% 80.6%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.43e-01 88.3% 90.3%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.70e-01 85.0% 82.8%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.16e-01 90.0% 76.6%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.44e-01 83.3% 74.6%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.56e-01 85.0% 71.8%
3kl9A02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.56 45.0 4.33e-01 96.7% 85.1%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.51e-01 85.0% 69.9%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 3.46e-01 85.0% 76.9%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.62e-01 100.0% 98.2%
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.55 46.0 4.17e-01 100.0% 85.6%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.16e-01 91.7% 78.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 4.07e-01 88.3% 76.9%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 40.0 3.37e-01 81.7% 81.7%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.47e-01 95.0% 98.5%
2y7bA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 3.25e-01 85.0% 79.1%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 36.0 3.69e-01 78.3% 75.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.12e-01 100.0% 75.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 4.20e-01 90.0% 87.1%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 43.0 3.73e-01 100.0% 58.9%
1iwlA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 40.0 3.00e-01 88.3% 79.1%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.32e-01 85.0% 72.5%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 4.13e-01 91.7% 91.5%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 3.51e-01 93.3% 79.4%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.75e-01 96.7% 97.7%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 44.0 4.25e-01 98.3% 85.5%
6m3aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.78e-01 96.7% 78.8%
2wz8A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 3.34e-01 100.0% 77.0%
6m3yA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.47e-01 96.7% 95.7%
3mb5A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.50 40.0 4.01e-01 90.0% 96.8%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4337472 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.67 56.0 4.90e-01 96.7% 65.3%
4254437 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.65 53.0 4.82e-01 95.0% 70.6%
3478828 220.1.1.28 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › hSac2 0.65 50.0 3.63e-01 85.0% 68.8%
4283898 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.64 53.0 4.65e-01 96.7% 64.2%
933 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.63 48.0 3.91e-01 85.0% 68.9%
3255028 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 48.0 3.46e-01 83.3% 53.5%
3490216 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.62 49.0 3.87e-01 86.7% 73.6%
5035941 1.1.4.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.62 53.0 4.56e-01 98.3% 89.0%
3878278 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 48.0 3.65e-01 88.3% 71.3%
3538471 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 46.0 3.73e-01 83.3% 71.7%
3337318 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 45.0 3.48e-01 80.0% 72.9%
3972951 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.61 51.0 4.84e-01 100.0% 93.3%
3518268 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 46.0 3.62e-01 85.0% 79.3%
3243970 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 50.0 4.40e-01 100.0% 93.0%
3471801 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 48.0 3.73e-01 88.3% 65.2%
4332239 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 46.0 3.56e-01 83.3% 61.5%
3715477 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.60 48.0 3.69e-01 88.3% 64.4%
3906508 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 45.0 3.62e-01 83.3% 69.6%
3719117 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.60 47.0 2.76e-01 88.3% 17.2%
3614247 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.77e-01 88.3% 80.0%
3938714 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 45.0 3.60e-01 83.3% 63.2%
4943079 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 46.0 3.42e-01 85.0% 64.5%
934 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 45.0 3.81e-01 83.3% 78.6%
3546981 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.59 46.0 3.62e-01 88.3% 66.4%
4207197 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 49.0 4.32e-01 100.0% 92.0%
3387360 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 49.0 4.51e-01 100.0% 81.2%
4096988 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 46.0 3.06e-01 85.0% 35.3%
3888963 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 46.0 2.88e-01 85.0% 25.9%
3257362 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 45.0 3.70e-01 83.3% 71.8%
4373113 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 49.0 4.22e-01 100.0% 87.6%
3858384 220.1.1.311 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › RasGEF 0.59 46.0 2.81e-01 88.3% 24.4%
3798461 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 45.0 3.61e-01 83.3% 75.8%
3961990 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.58 47.0 4.50e-01 95.0% 89.3%
3256764 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 49.0 3.95e-01 100.0% 92.3%
4361509 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.58 48.0 4.23e-01 100.0% 92.0%
4930890 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 47.0 4.48e-01 96.7% 82.7%
3593363 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 45.0 3.65e-01 86.7% 68.3%
3789113 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 45.0 2.93e-01 85.0% 29.8%
3800494 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 43.0 3.39e-01 83.3% 64.9%
3517377 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 46.0 4.13e-01 100.0% 63.5%
3647393 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.57 46.0 3.63e-01 90.0% 55.2%
4023915 220.1.1.53 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.57 45.0 3.70e-01 90.0% 80.0%
3255034 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 42.0 3.34e-01 83.3% 57.0%
3480564 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.34e-01 85.0% 78.6%
3877478 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 46.0 3.91e-01 100.0% 55.0%
3558926 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 45.0 3.96e-01 100.0% 60.0%
4055256 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 44.0 3.95e-01 100.0% 60.0%
3254541 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 41.0 3.47e-01 83.3% 77.3%
3570700 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 46.0 3.74e-01 100.0% 48.7%
3397845 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 45.0 3.92e-01 100.0% 67.6%
3560712 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 41.0 3.49e-01 83.3% 70.5%
3282593 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.55 42.0 2.90e-01 88.3% 58.3%
3507639 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.55 47.0 4.51e-01 100.0% 94.3%
3936053 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.54 45.0 4.31e-01 93.3% 91.4%
3910727 4.1.1.353 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 0.54 47.0 4.60e-01 100.0% 95.4%
5079674 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.54 45.0 4.26e-01 100.0% 93.3%
3612184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 41.0 4.18e-01 93.3% 85.0%
3918975 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 40.0 3.35e-01 83.3% 65.2%
3506704 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 40.0 3.36e-01 85.0% 70.4%
3995153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.39e-01 83.3% 75.2%
3512272 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 43.0 4.16e-01 100.0% 92.0%
4666540 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.52 42.0 3.94e-01 100.0% 98.8%
3858885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 41.0 4.25e-01 86.7% 96.4%
4021603 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 41.0 3.37e-01 100.0% 56.2%