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MN096357.1__QDK01341.1__SEA_WATERT_72__00071

Bact-Vir

MN096357.1__QDK01341.1__SEA_WATERT_72__00071

Identity

Accession:
MN096357 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microbacterium_phage_WaterT

TaxID: 2593342

Cluster

View cluster (52 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-90
PDB
Domain cluster: rep: ON526969.1__USH44526.1__SEA_CASSITA_72__00071__D13-114
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 60.0 5.02e-01 100.0% 52.7%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 67.0 6.15e-01 100.0% 92.8%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 66.0 6.05e-01 100.0% 86.5%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 58.0 5.66e-01 100.0% 84.5%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 64.0 6.07e-01 100.0% 97.1%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 64.0 6.17e-01 100.0% 92.9%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 63.0 5.93e-01 100.0% 88.5%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 60.0 6.07e-01 100.0% 94.4%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 61.0 5.62e-01 100.0% 88.4%
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 59.0 5.68e-01 100.0% 85.6%
1o7iB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 57.0 5.26e-01 100.0% 72.8%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 59.0 5.54e-01 100.0% 78.9%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 57.0 5.51e-01 100.0% 93.1%
3mc0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 54.0 5.53e-01 98.9% 94.0%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 55.0 4.78e-01 100.0% 59.9%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 54.0 5.66e-01 100.0% 96.3%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 58.0 5.15e-01 100.0% 70.2%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.64 46.0 3.44e-01 76.4% 95.4%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 49.0 5.11e-01 97.8% 92.6%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.63 54.0 5.46e-01 100.0% 97.8%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 54.0 4.50e-01 100.0% 56.7%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 52.0 4.85e-01 100.0% 75.9%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 53.0 5.17e-01 100.0% 91.8%
3klqA01 2.60.40.3050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 34.0 3.13e-01 85.4% 45.4%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.55 34.0 3.77e-01 73.0% 80.9%
3oguA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 43.0 3.94e-01 88.8% 91.1%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 40.0 2.75e-01 83.1% 38.9%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 39.0 2.69e-01 82.0% 37.6%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.51 41.0 2.89e-01 89.9% 89.3%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4084495 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.79 73.0 6.91e-01 100.0% 92.4%
3365669 2.1.1.229 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.79 74.0 6.79e-01 100.0% 88.2%
4952879 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.77 66.0 6.11e-01 100.0% 73.6%
3680255 2.1.1.67 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.75 60.0 5.60e-01 100.0% 69.7%
3210912 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 60.0 6.17e-01 100.0% 91.8%
4022913 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 67.0 6.08e-01 100.0% 76.5%
5060038 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.73 66.0 6.03e-01 100.0% 76.5%
5026916 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.72 67.0 6.17e-01 100.0% 81.8%
3167533 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.72 67.0 5.82e-01 100.0% 79.2%
3924081 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 67.0 5.68e-01 100.0% 73.6%
4979630 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 67.0 6.07e-01 100.0% 82.6%
3215667 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 67.0 6.00e-01 100.0% 86.7%
4047115 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 65.0 6.28e-01 100.0% 97.0%
4941242 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.72 67.0 6.18e-01 100.0% 81.8%
3656603 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.72 64.0 5.84e-01 100.0% 73.9%
5003679 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.72 55.0 5.54e-01 100.0% 81.1%
4948015 2.1.1.358 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM 0.71 66.0 6.15e-01 100.0% 83.6%
5025358 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.71 66.0 6.01e-01 100.0% 82.6%
3741507 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.71 66.0 6.32e-01 100.0% 96.0%
4988989 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 62.0 5.87e-01 100.0% 79.0%
3244059 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.71 64.0 6.03e-01 100.0% 81.9%
3814285 2.1.1.229 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.71 66.0 6.11e-01 100.0% 89.1%
5082734 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 65.0 5.86e-01 100.0% 76.7%
3650641 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.71 66.0 5.62e-01 100.0% 71.1%
4970159 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 59.0 5.77e-01 100.0% 84.2%
3594029 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 65.0 6.17e-01 100.0% 84.8%
5030363 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.70 65.0 6.04e-01 100.0% 81.8%
3409288 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.70 65.0 6.04e-01 100.0% 83.6%
3491964 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 65.0 5.66e-01 100.0% 92.3%
3616890 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.70 62.0 5.77e-01 100.0% 87.8%
5011190 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.70 65.0 5.82e-01 100.0% 75.8%
4024258 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 65.0 5.83e-01 100.0% 84.2%
4982792 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.70 63.0 5.17e-01 100.0% 90.6%
3255112 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.70 65.0 5.90e-01 100.0% 82.6%
5003898 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.70 61.0 5.68e-01 100.0% 85.2%
3594959 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 62.0 5.84e-01 100.0% 80.9%
3788866 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 63.0 5.40e-01 100.0% 67.9%
3633377 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 62.0 5.02e-01 100.0% 74.1%
3617977 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 62.0 5.56e-01 100.0% 78.4%
3507463 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 61.0 5.64e-01 100.0% 83.5%
4029733 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 5.54e-01 100.0% 74.8%
4993852 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.77e-01 100.0% 83.6%
3719465 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 62.0 5.79e-01 100.0% 86.4%
4029582 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 62.0 5.71e-01 100.0% 86.1%
5035945 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.69 63.0 5.74e-01 100.0% 77.4%
4680392 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.68 63.0 5.87e-01 100.0% 88.2%
3604100 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 4.80e-01 100.0% 63.0%
3392389 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.56e-01 100.0% 83.3%
5000768 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.68 62.0 5.68e-01 100.0% 81.7%
4025160 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.68 61.0 5.47e-01 100.0% 88.0%
3611898 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.46e-01 100.0% 75.2%
4277262 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.68 60.0 5.54e-01 100.0% 85.6%
3690510 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.68 60.0 5.64e-01 100.0% 91.8%
4966537 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 4.98e-01 100.0% 89.4%
5015768 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 57.0 5.51e-01 97.8% 81.0%
2988967 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.68 61.0 5.02e-01 100.0% 91.3%
3798423 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.34e-01 100.0% 77.7%
4309330 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.68 62.0 5.68e-01 100.0% 84.3%
3375524 2.1.1.229 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.68 61.0 5.54e-01 100.0% 78.3%
3712229 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.68 61.0 4.91e-01 100.0% 77.6%
152653 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.68 60.0 6.07e-01 100.0% 94.4%
3555125 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.67 61.0 5.38e-01 100.0% 80.0%
4296288 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.67 60.0 5.72e-01 100.0% 96.2%
4137219 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.67 59.0 5.76e-01 100.0% 97.0%
4170378 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.67 60.0 5.53e-01 100.0% 88.7%
4044404 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.67 60.0 5.68e-01 100.0% 99.0%
5052151 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.67 58.0 5.42e-01 100.0% 79.1%
2330653 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.67 57.0 5.68e-01 100.0% 90.4%
159268 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.67 60.0 4.56e-01 100.0% 45.1%
3610888 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 61.0 5.32e-01 100.0% 67.7%
2541776 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.66 58.0 5.50e-01 100.0% 88.1%
3839607 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.66 59.0 5.39e-01 100.0% 86.4%
3991931 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.66 61.0 5.49e-01 100.0% 77.5%
3963716 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 60.0 5.57e-01 100.0% 85.5%
3481495 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.65 57.0 4.68e-01 100.0% 88.2%
4593266 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 44.0 4.80e-01 96.6% 86.7%
3279044 2.1.1.314 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27099 0.62 43.0 4.87e-01 94.4% 100.0%
3661180 2.1.1.223 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.61 53.0 5.12e-01 100.0% 86.0%
3484504 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.60 28.0 3.02e-01 85.4% 46.7%
3700294 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 53.0 4.80e-01 100.0% 75.2%
3956143 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 50.0 5.08e-01 100.0% 93.3%
5037634 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 48.0 4.89e-01 100.0% 90.6%
3256260 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 4.73e-01 98.9% 89.5%
3275994 2.1.1.16 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.57 50.0 4.50e-01 100.0% 77.3%
3608173 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.94e-01 94.4% 34.7%
3498900 2.3.1.0 ↗ beta barrels › OB-fold › TIMP-like › TIMP-like 0.52 45.0 3.70e-01 98.9% 52.1%