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MN096357.1__QDK01387.1__SEA_WATERT_120__00119
Bact-VirMN096357.1__QDK01387.1__SEA_WATERT_120__00119
Identity
- Accession:
- MN096357 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-82
Domain cluster:
rep: NC_048048.2__YP_009810236.1__HOU03_gp024__00024__D4-98
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26096.1 best | DUF8033 | 50.7 | 1.50e-13 | 86.2% | 80.8% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.74 | 53.0 | 4.12e-01 | 73.8% | 78.3% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.70 | 49.0 | 3.86e-01 | 71.2% | 78.5% |
| 1hyrC01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.69 | 48.0 | 3.69e-01 | 72.5% | 77.8% |
| 3witA00 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.67 | 43.0 | 4.78e-01 | 83.7% | 82.8% |
| 3d2uE01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.64 | 44.0 | 3.42e-01 | 72.5% | 82.4% |
| 3dbxA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.63 | 45.0 | 3.46e-01 | 73.8% | 77.8% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 44.0 | 3.45e-01 | 73.8% | 77.6% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.61 | 43.0 | 3.35e-01 | 73.8% | 78.9% |
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 50.0 | 4.76e-01 | 88.7% | 95.7% |
| 1t7vA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.58 | 40.0 | 3.20e-01 | 73.8% | 79.8% |
| 4d8pB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.57 | 40.0 | 3.70e-01 | 72.5% | 65.7% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.57 | 48.0 | 3.51e-01 | 90.0% | 60.8% |
| 2xvlA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.56 | 44.0 | 3.21e-01 | 87.5% | 56.8% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.55 | 32.0 | 3.20e-01 | 72.5% | 53.5% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.14e-01 | 92.5% | 66.4% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.67e-01 | 87.5% | 36.7% |
| 1q7hA01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.53 | 37.0 | 4.11e-01 | 73.8% | 100.0% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.53 | 39.0 | 3.79e-01 | 82.5% | 81.2% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.53 | 38.0 | 3.22e-01 | 77.5% | 55.5% |
| 2q07A02 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.51 | 36.0 | 3.94e-01 | 73.8% | 89.2% |
| 3bu2A02 | 3.30.1940.10 | Alpha Beta › 2-Layer Sandwich › Nucleic acid-binding protein fold › YtpR-like | 0.51 | 34.0 | 3.65e-01 | 91.3% | 79.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700776 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.69 | 44.0 | 4.70e-01 | 100.0% | 74.3% |
| 4934918 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.65 | 38.0 | 4.08e-01 | 70.0% | 67.1% |
| 3755672 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.65 | 44.0 | 3.28e-01 | 80.0% | 28.0% |
| 3932270 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.65 | 44.0 | 2.52e-01 | 71.2% | 15.8% |
| 4165617 | 865.1.1.0 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain | 0.63 | 44.0 | 3.77e-01 | 71.2% | 93.6% |
| 169555 | 233.1.1.6 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 | 0.63 | 45.0 | 3.46e-01 | 73.8% | 77.3% |
| 4003675 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.63 | 43.0 | 2.65e-01 | 71.2% | 27.3% |
| 4985641 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 36.0 | 3.16e-01 | 100.0% | 37.6% |
| 4860677 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.60 | 41.0 | 2.55e-01 | 70.0% | 43.5% |
| 5057575 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.59 | 48.0 | 3.29e-01 | 86.3% | 75.6% |
| 3237994 | 5.1.4.219 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N | 0.59 | 43.0 | 2.62e-01 | 76.2% | 36.3% |
| 3434504 | 5.1.4.661 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st | 0.58 | 40.0 | 2.59e-01 | 71.2% | 21.6% |
| 3411255 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.58 | 40.0 | 2.49e-01 | 71.2% | 18.5% |
| 3915934 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.58 | 47.0 | 2.95e-01 | 86.3% | 31.5% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.58 | 45.0 | 3.10e-01 | 83.7% | 25.0% |
| 4965842 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.57 | 46.0 | 3.20e-01 | 87.5% | 77.0% |
| 3601975 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 38.0 | 2.45e-01 | 70.0% | 21.7% |
| 3197766 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.56 | 42.0 | 2.40e-01 | 80.0% | 10.3% |
| 3846048 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.55 | 42.0 | 3.12e-01 | 81.2% | 32.7% |
| 3936024 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 41.0 | 2.71e-01 | 78.8% | 21.6% |
| 5075886 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.55 | 40.0 | 4.23e-01 | 76.2% | 100.0% |
| 3256681 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.54 | 44.0 | 2.91e-01 | 100.0% | 20.0% |
| 4026913 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.54 | 40.0 | 3.97e-01 | 78.8% | 96.5% |
| 5055306 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 2.64e-01 | 71.2% | 37.1% |
| 4952432 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.54 | 39.0 | 4.16e-01 | 76.2% | 100.0% |
| 4987739 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.53 | 44.0 | 3.28e-01 | 96.2% | 82.1% |
| 6438 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.53 | 38.0 | 4.13e-01 | 75.0% | 100.0% |
| 5047479 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.49e-01 | 78.8% | 66.4% |
| 4031639 | 241.7.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N | 0.52 | 40.0 | 3.91e-01 | 100.0% | 76.7% |
| 3328172 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.51 | 43.0 | 3.10e-01 | 100.0% | 63.9% |
| 5021241 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.51 | 37.0 | 3.94e-01 | 76.2% | 100.0% |
| 3271259 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 39.0 | 3.86e-01 | 98.8% | 77.6% |
| 5058991 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.50 | 37.0 | 3.91e-01 | 77.5% | 100.0% |