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MN096358.1__QDK01413.1__SEA_LEEROYJENKINS_16__00016

Bact-Vir

MN096358.1__QDK01413.1__SEA_LEEROYJENKINS_16__00016

Identity

Accession:
MN096358 ↗
Kingdom:
phage

Quality

94.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-175
PDB
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e94A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.80 75.0 7.52e-01 100.0% 96.6%
1q5qH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.80 77.0 6.92e-01 100.0% 86.6%
1rypL00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.80 77.0 7.04e-01 100.0% 83.5%
1yarH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.79 77.0 7.17e-01 100.0% 86.2%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.79 76.0 7.47e-01 100.0% 96.2%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.79 76.0 6.89e-01 100.0% 79.5%
6qm7J00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.78 75.0 7.02e-01 100.0% 87.7%
6muwJ00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.78 74.0 6.95e-01 100.0% 88.3%
6qm7K00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.78 74.0 6.93e-01 100.0% 91.7%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.77 74.0 7.14e-01 100.0% 90.6%
6muwH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.77 74.0 7.04e-01 100.0% 88.8%
6e5bN00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.77 74.0 7.00e-01 100.0% 87.9%
1ryp200 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.77 73.0 6.50e-01 100.0% 81.1%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.76 72.0 6.82e-01 100.0% 90.9%
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.75 72.0 6.84e-01 100.0% 91.8%
3unbF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.73 69.0 6.07e-01 100.0% 73.8%
1g0uE00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.72 68.0 6.08e-01 100.0% 78.7%
8f66A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.71 68.0 6.27e-01 100.0% 84.8%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.71 63.0 5.00e-01 95.3% 96.2%
6muwB00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.71 67.0 5.98e-01 100.0% 77.7%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.70 62.0 5.19e-01 95.3% 99.0%
2j82A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.70 63.0 5.75e-01 95.3% 99.1%
5fmgF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.70 65.0 5.92e-01 100.0% 76.7%
6jkvA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.70 63.0 5.71e-01 97.1% 98.7%
2pk0A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.70 63.0 5.52e-01 96.5% 98.4%
5fmgA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.69 64.0 5.86e-01 100.0% 76.3%
6qm7A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.69 65.0 5.67e-01 100.0% 77.0%
1rypA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.69 65.0 5.68e-01 100.0% 76.5%
2hezA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.68 63.0 5.11e-01 100.0% 88.3%
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.68 63.0 5.14e-01 100.0% 90.2%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.66 62.0 5.34e-01 100.0% 82.8%
4zfjD00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 45.0 4.13e-01 84.3% 88.1%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2140348 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.82 79.0 7.64e-01 100.0% 95.2%
5029254 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.82 78.0 7.38e-01 100.0% 90.5%
4023905 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.81 75.0 7.14e-01 99.4% 85.1%
5051147 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.81 77.0 6.74e-01 100.0% 93.8%
4338424 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.81 77.0 6.57e-01 100.0% 72.7%
4278248 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.80 77.0 7.45e-01 100.0% 93.7%
2140349 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.80 77.0 7.48e-01 100.0% 96.8%
3593380 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.80 76.0 7.29e-01 100.0% 88.9%
3696854 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.80 75.0 7.15e-01 100.0% 86.2%
5052929 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.80 77.0 7.23e-01 100.0% 89.0%
5030141 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.80 77.0 6.94e-01 100.0% 80.5%
4023682 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.80 76.0 7.12e-01 100.0% 87.8%
5065765 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.79 76.0 7.21e-01 100.0% 88.9%
3508306 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.79 76.0 6.70e-01 100.0% 84.3%
4023765 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.79 76.0 6.88e-01 100.0% 87.6%
2980432 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.79 75.0 7.06e-01 100.0% 87.7%
2980438 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.77 74.0 6.87e-01 100.0% 87.0%
3400905 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.77 73.0 6.72e-01 100.0% 83.3%
5000313 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.77 74.0 6.94e-01 100.0% 88.5%
4610848 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.76 72.0 6.65e-01 100.0% 83.3%
3629263 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.76 72.0 6.82e-01 100.0% 91.0%
4998349 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.76 72.0 6.73e-01 100.0% 85.1%
3513468 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.76 72.0 6.58e-01 100.0% 91.2%
2521302 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.75 71.0 6.83e-01 100.0% 91.8%
5057849 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.75 71.0 6.65e-01 100.0% 86.3%
4302934 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.74 70.0 6.70e-01 100.0% 90.8%
4013262 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.74 70.0 5.77e-01 100.0% 73.3%
3438106 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.74 70.0 6.05e-01 100.0% 71.9%
3487530 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.73 70.0 6.00e-01 100.0% 70.5%
3558294 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.73 69.0 6.15e-01 100.0% 76.6%
4618626 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.73 69.0 5.96e-01 100.0% 74.3%
3598884 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.73 69.0 6.19e-01 100.0% 78.5%
3797631 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.73 68.0 6.01e-01 100.0% 74.9%
4023842 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.73 69.0 5.94e-01 100.0% 72.5%
2980416 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.72 68.0 6.14e-01 100.0% 75.6%
3733947 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.72 69.0 5.71e-01 100.0% 74.9%
4018216 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.72 68.0 6.01e-01 100.0% 76.7%
3209991 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.72 68.0 5.70e-01 100.0% 74.1%
4999721 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.72 68.0 5.94e-01 100.0% 73.4%
3576670 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.72 68.0 6.14e-01 100.0% 80.4%
3179520 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.71 68.0 5.85e-01 100.0% 71.8%
3482845 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.71 67.0 5.84e-01 100.0% 71.9%
3278864 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.70 66.0 5.82e-01 100.0% 74.7%
4932317 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.70 66.0 6.23e-01 100.0% 86.8%
3995459 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.70 67.0 5.85e-01 100.0% 73.7%
3580339 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.70 67.0 5.68e-01 100.0% 68.1%
3403944 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.70 67.0 5.78e-01 100.0% 73.6%
4890842 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.70 66.0 6.03e-01 100.0% 80.2%
3261503 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.70 66.0 5.90e-01 100.0% 80.9%
3735213 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.70 66.0 5.68e-01 100.0% 72.0%
968966 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.68 64.0 5.83e-01 100.0% 82.7%
3690304 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.68 55.0 4.57e-01 84.3% 90.5%
3285001 210.1.2.0 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain 0.67 63.0 4.99e-01 99.4% 87.3%
5077548 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.66 49.0 4.01e-01 75.0% 78.6%
4174454 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.65 58.0 4.83e-01 96.5% 90.0%
4975637 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.64 29.0 4.25e-01 76.2% 93.8%
3574350 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.63 53.0 4.80e-01 89.5% 97.0%
6452 4111.1.1.1 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy 0.52 23.0 3.37e-01 93.6% 93.5%