←Back to structures

MN096363.1__QDK01970.1__SEA_GIBBLES_11__00011

Bact-Vir

MN096363.1__QDK01970.1__SEA_GIBBLES_11__00011

Identity

Accession:
MN096363 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Orchidvirus› Gordonia_phage_Gibbles

TaxID: 2593334

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-41
PDB
Domain cluster: representative
CATH (89)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.82 65.0 4.60e-01 87.8% 42.5%
1bxgA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.82 62.0 4.26e-01 82.9% 48.9%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.77 62.0 4.18e-01 90.2% 23.9%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.75 59.0 3.99e-01 87.8% 30.9%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.74 57.0 4.00e-01 85.4% 26.7%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 62.0 3.88e-01 100.0% 17.9%
2ea9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 53.0 4.13e-01 82.9% 35.1%
3bexA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.73 57.0 3.98e-01 92.7% 26.5%
3i6eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.72 58.0 4.37e-01 90.2% 40.8%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 60.0 3.81e-01 100.0% 17.8%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 55.0 3.93e-01 87.8% 27.5%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.71 55.0 4.63e-01 87.8% 54.1%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.71 55.0 4.93e-01 85.4% 60.3%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 58.0 4.72e-01 97.6% 47.6%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 54.0 3.77e-01 85.4% 33.8%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.70 53.0 4.04e-01 85.4% 35.3%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.70 52.0 4.27e-01 82.9% 42.5%
2gnxA02 3.30.450.240 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.70 54.0 4.03e-01 87.8% 33.0%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.70 62.0 4.87e-01 100.0% 50.6%
3e5dA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.69 50.0 3.64e-01 80.5% 26.4%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 53.0 3.85e-01 85.4% 31.7%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.69 57.0 4.14e-01 95.1% 33.1%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 56.0 3.22e-01 90.2% 70.5%
5iroD00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 57.0 4.37e-01 97.6% 53.9%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 57.0 4.06e-01 95.1% 42.5%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.69 54.0 3.28e-01 90.2% 13.1%
3dg6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 54.0 4.00e-01 90.2% 48.2%
2r9yA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.68 51.0 3.55e-01 82.9% 43.8%
7b3aA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.68 50.0 3.44e-01 80.5% 24.2%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.68 55.0 4.13e-01 95.1% 72.1%
1o7dD01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.68 51.0 3.16e-01 85.4% 41.0%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 58.0 3.63e-01 100.0% 70.3%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 56.0 3.30e-01 95.1% 20.3%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.68 55.0 4.05e-01 95.1% 43.2%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.67 53.0 4.02e-01 92.7% 40.7%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.67 53.0 3.83e-01 90.2% 34.7%
3bp1A02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.67 53.0 3.74e-01 90.2% 76.7%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 51.0 3.73e-01 90.2% 29.8%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.66 48.0 3.65e-01 80.5% 30.6%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.66 54.0 3.79e-01 92.7% 30.9%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 53.0 4.12e-01 92.7% 40.0%
4pg4A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 50.0 3.41e-01 85.4% 73.9%
1sqiA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 48.0 3.23e-01 82.9% 21.0%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.65 49.0 3.62e-01 82.9% 55.9%
5mj3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 49.0 3.93e-01 85.4% 70.1%
1imvA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.65 48.0 3.28e-01 82.9% 37.9%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 49.0 3.71e-01 87.8% 31.3%
4cvuA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 52.0 3.91e-01 97.6% 69.0%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.65 52.0 4.08e-01 100.0% 53.4%
5hsqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 51.0 3.70e-01 92.7% 27.9%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.64 49.0 3.88e-01 90.2% 66.0%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.64 50.0 3.49e-01 90.2% 39.3%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.64 49.0 3.20e-01 85.4% 85.2%
1jmoA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.64 48.0 3.35e-01 82.9% 42.0%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.63 48.0 3.73e-01 82.9% 66.3%
6ksrA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 49.0 3.43e-01 95.1% 31.2%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.63 48.0 3.38e-01 85.4% 27.1%
3v6oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 3.75e-01 90.2% 70.0%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.62 45.0 3.38e-01 80.5% 47.8%
3go2A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 49.0 3.74e-01 95.1% 36.0%
1uwyA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.62 49.0 3.91e-01 97.6% 57.7%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 52.0 3.13e-01 100.0% 24.0%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 46.0 3.69e-01 85.4% 67.0%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.61 47.0 2.63e-01 85.4% 6.6%
2w59B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 48.0 3.70e-01 95.1% 71.1%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 3.26e-01 78.0% 29.8%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 48.0 3.79e-01 92.7% 42.9%
2xvsA00 2.40.50.550 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 47.0 3.27e-01 92.7% 54.2%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 42.0 3.26e-01 82.9% 30.8%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.59 46.0 3.31e-01 92.7% 47.8%
2qv8A00 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.58 48.0 3.41e-01 100.0% 81.2%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.58 45.0 3.45e-01 95.1% 55.4%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 39.0 3.62e-01 73.2% 52.6%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.57 45.0 3.59e-01 100.0% 62.5%
2cg7A02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.57 41.0 4.07e-01 78.0% 100.0%
2vzsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.34e-01 92.7% 63.6%
1uurA04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 46.0 3.36e-01 97.6% 34.6%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.57 43.0 2.93e-01 87.8% 28.3%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 43.0 3.30e-01 85.4% 33.7%
1ig8A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 42.0 3.19e-01 92.7% 43.3%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 43.0 2.83e-01 97.6% 51.7%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.24e-01 95.1% 47.1%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 2.91e-01 100.0% 52.4%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.55 38.0 3.22e-01 82.9% 40.4%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 40.0 3.68e-01 78.0% 57.1%
1bdgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 40.0 2.87e-01 90.2% 34.1%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.31e-01 78.0% 48.5%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.06e-01 87.8% 41.8%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 36.0 3.23e-01 80.5% 51.6%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3427431 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.84 58.0 6.36e-01 73.2% 100.0%
3924597 330.16.1.0 ↗ a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain 0.83 65.0 5.38e-01 90.2% 50.0%
5006258 205.1.1.128 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › APS-reductase_C 0.82 63.0 4.23e-01 87.8% 23.4%
185584 3385.1.1.1 ↗ beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › AltA1 0.82 65.0 4.51e-01 87.8% 39.2%
3720887 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.81 62.0 4.27e-01 82.9% 25.9%
4200272 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.80 59.0 4.55e-01 82.9% 35.6%
3338026 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.78 64.0 5.17e-01 92.7% 50.0%
3291744 2484.1.1.4 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.78 61.0 4.94e-01 87.8% 48.8%
5017958 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.77 60.0 4.09e-01 87.8% 40.7%
4177916 2008.1.1.20 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 0.77 62.0 4.07e-01 87.8% 21.8%
4297175 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.77 58.0 4.48e-01 85.4% 37.8%
3313644 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.76 61.0 4.58e-01 90.2% 37.1%
3443454 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.75 62.0 3.86e-01 97.6% 16.0%
3291057 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.75 58.0 4.89e-01 85.4% 50.0%
3750853 330.1.1.18 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.75 60.0 4.33e-01 90.2% 33.3%
5011673 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.75 60.0 4.35e-01 90.2% 34.8%
5008670 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.74 58.0 3.54e-01 87.8% 16.0%
4596967 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.74 63.0 3.93e-01 100.0% 17.6%
853 9.1.1.23 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.74 57.0 3.99e-01 85.4% 26.5%
1222122 12.3.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.74 57.0 3.42e-01 85.4% 15.5%
5060852 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.74 52.0 5.11e-01 80.5% 68.9%
3707788 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.73 60.0 3.78e-01 95.1% 20.9%
4355046 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.73 58.0 4.42e-01 90.2% 37.9%
3607725 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 63.0 3.61e-01 100.0% 17.3%
3515029 223.2.1.46 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M 0.73 59.0 4.03e-01 92.7% 32.0%
3216442 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 57.0 3.67e-01 90.2% 18.6%
3744503 2484.8.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 0.73 60.0 3.61e-01 95.1% 18.6%
3513185 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.73 59.0 4.00e-01 90.2% 24.5%
4980248 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.72 55.0 4.93e-01 85.4% 58.6%
3934802 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.72 54.0 4.15e-01 82.9% 42.1%
4203602 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.71 55.0 4.15e-01 90.2% 34.3%
4512935 2.4.1.3 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.71 52.0 3.63e-01 82.9% 25.0%
4958666 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.71 57.0 4.33e-01 92.7% 38.1%
4028555 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.71 52.0 4.28e-01 75.6% 44.0%
3707477 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 56.0 3.27e-01 92.7% 99.5%
3529132 12.1.1.89 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GMNC_C 0.71 55.0 5.81e-01 87.8% 100.0%
4783841 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.71 53.0 3.18e-01 85.4% 79.6%
2983288 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 4.24e-01 85.4% 61.8%
1830108 2484.8.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 0.70 59.0 3.55e-01 95.1% 16.3%
3534391 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.70 57.0 3.70e-01 92.7% 21.6%
3781182 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 55.0 3.15e-01 87.8% 8.3%
3785002 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.70 53.0 4.28e-01 85.4% 41.2%
4410540 3321.1.1.1 ↗ a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander 0.70 54.0 4.37e-01 87.8% 90.6%
3606266 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 60.0 3.37e-01 100.0% 28.0%
3629460 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.70 54.0 3.29e-01 85.4% 12.7%
3507420 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 53.0 4.16e-01 87.8% 38.9%
3790377 223.2.1.49 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › C12orf66_like 0.69 54.0 3.70e-01 87.8% 25.3%
3230371 3180.1.1.0 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.69 54.0 4.07e-01 90.2% 33.6%
3414142 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.69 52.0 3.50e-01 82.9% 20.6%
4255589 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.69 58.0 4.35e-01 95.1% 78.0%
3492079 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 55.0 4.32e-01 95.1% 41.2%
3741756 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.69 50.0 4.06e-01 82.9% 39.8%
3597339 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 58.0 3.55e-01 97.6% 51.9%
3321360 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.69 53.0 4.43e-01 87.8% 54.7%
4001239 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 52.0 4.09e-01 90.2% 37.9%
3685866 2.1.1.81 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.68 49.0 3.60e-01 82.9% 29.1%
3911145 223.7.1.1 ↗ a+b three layers › Profilin-like › FLJ32549 C-terminal domain-like › FLJ32549 C-terminal domain-like › C12orf66_like 0.68 51.0 3.63e-01 87.8% 25.7%
4502878 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.68 51.0 4.60e-01 85.4% 58.3%
3478161 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.67 56.0 4.00e-01 97.6% 29.6%
3871253 220.1.1.122 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.67 56.0 3.95e-01 100.0% 64.3%
3593927 7525.1.1.0 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like 0.67 53.0 3.37e-01 92.7% 94.8%
223811 3583.1.1.1 ↗ few secondary structure elements › FusB family Zn-binding domain › FusB family Zn-binding domain › FusB family Zn-binding domain › FBP_C 0.67 54.0 3.96e-01 95.1% 56.2%
3224134 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.67 52.0 3.66e-01 90.2% 25.5%
3983195 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.67 49.0 4.83e-01 80.5% 73.3%
4223164 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 52.0 3.17e-01 87.8% 12.5%
5051694 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.66 50.0 3.80e-01 87.8% 60.9%
4304579 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.66 51.0 4.38e-01 85.4% 53.8%
5022543 2002.1.1.36 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.66 51.0 2.85e-01 85.4% 12.7%
3988584 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.66 48.0 3.77e-01 85.4% 34.0%
3993395 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.65 54.0 4.59e-01 100.0% 73.3%
4946560 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.65 44.0 3.08e-01 78.0% 20.8%
4028996 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 52.0 3.66e-01 92.7% 27.6%
3989850 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 54.0 4.17e-01 97.6% 41.0%
3989857 706.2.1.0 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G 0.65 50.0 3.56e-01 90.2% 28.6%
3593907 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 52.0 3.19e-01 97.6% 13.8%
3547439 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.65 48.0 3.01e-01 82.9% 23.8%
3717900 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.65 50.0 2.91e-01 87.8% 82.7%
5047575 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.63 54.0 3.93e-01 97.6% 92.0%
3266673 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 51.0 3.10e-01 100.0% 92.6%
4077485 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 47.0 4.14e-01 85.4% 53.8%
3166240 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 47.0 4.22e-01 82.9% 63.3%
5036655 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 50.0 4.54e-01 97.6% 71.7%
3629860 223.2.1.43 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_M 0.62 48.0 3.32e-01 90.2% 24.5%
3977405 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.62 47.0 3.68e-01 85.4% 38.0%
4236690 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.61 45.0 3.99e-01 92.7% 78.4%
4131660 2.1.1.57 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.61 44.0 3.68e-01 87.8% 42.5%
3575027 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.60 47.0 3.69e-01 92.7% 58.0%
3440964 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 45.0 2.79e-01 95.1% 40.3%
3948977 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 44.0 3.43e-01 92.7% 38.2%
3661102 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.58 43.0 4.07e-01 82.9% 65.5%
4990321 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.57 42.0 2.83e-01 95.1% 18.7%
3805876 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 39.0 2.52e-01 97.6% 12.7%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 39.0 3.45e-01 80.5% 50.8%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 38.0 3.19e-01 78.0% 67.5%
3575490 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 39.0 3.89e-01 78.0% 71.1%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 37.0 3.14e-01 75.6% 38.7%
4588127 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.52 36.0 3.30e-01 80.5% 50.0%
4961179 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.52 37.0 3.58e-01 80.5% 70.0%